Gene Francci3_0147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0147 
Symbol 
ID3903078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp175762 
End bp176376 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content72% 
IMG OID637877481 
Productmethylated-DNA--protein-cysteine methyltransferase 
Protein accessionYP_479270 
Protein GI86738870 
COG category[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCG ACGATCTTCG GGCGCCCGAT CCGTTCGCCG CCATGCCGGA CCTCGATGCC 
CGGCTCAGTC GCCTGCGCCA ACGGCTCGCG GCCGAGGCCG AGCGGGAGGG TCTGCTGGAC
GTGGCCTACC GCAGCGTGGA CTCGCCCGTC GGGCGGCTCC TGCTCGCAGC GACCCCGCAG
GGGCTGGTCC GGGTCGCCTA TGAGGTGGAG GACCACGACG CCGTGCTCGC GTCGCTGTCC
GAGCGGATCA GCCCCCGCGT TCTGCGGGCG AACGGGCGGC TCGATCCCGT CGCCGTTCAG
CTCGACGCGT ACTTCGCCGG GGCCCGGTCA CGCTTCACAC TGAGCCTCGA TCTGCGGCTC
GCGACGGGAT TCCGGCTCTC GGTGCTGGAG CACCTGCGCG ACATCCCCTA TGGCAGCACG
GCCAGCTACG CGGCGGTCGC CGCGCTGGCG GGCAGCCCTC GCGCGGTCCG GGCAGTGGGG
ACGGCCTGCG CGACGAATCC ACTGCCCGTG ATCCTTCCAT GTCATCGCGT CATATACAGC
GACGGCCGGA TCGGCCGCTA CCTGGGCGGC GAGCAGGCCA AGCAATCCCT GCTGCGGCTC
GAGGGGGCAC TCTGA
 
Protein sequence
MTSDDLRAPD PFAAMPDLDA RLSRLRQRLA AEAEREGLLD VAYRSVDSPV GRLLLAATPQ 
GLVRVAYEVE DHDAVLASLS ERISPRVLRA NGRLDPVAVQ LDAYFAGARS RFTLSLDLRL
ATGFRLSVLE HLRDIPYGST ASYAAVAALA GSPRAVRAVG TACATNPLPV ILPCHRVIYS
DGRIGRYLGG EQAKQSLLRL EGAL