Gene Francci3_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0131 
Symbol 
ID3903408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp161702 
End bp162172 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID637877465 
ProductNUDIX hydrolase 
Protein accessionYP_479254 
Protein GI86738854 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCGTG TTGACTACTT GAACGATCCC GAAGCTCCAG CGGCTAACAG CATTGTTCCG 
GCTGTAAGTG CGATCGTTCC CGATAGCGAA GGACGGATTC TCCTGATCCG TCGTACCGAC
AACGGATATT GGGCCATCCC TGGCGGGGGT GTTGAGCCTG GCGAATCAGT CAGGCAGGCT
ACCGCGCGTG AAGTCATGGA AGAGACCGGG ATATCCTGCG AAGTAACCGG AGTGGTTGGG
ATCTACTCCA ATCCTGGCCA CGTAGCGGCC TACGACAATG GCGAGGTGCG GCAACAATTC
TCCATCTGTT TTCGAACCAG GATGACCGGT GGTGAACCTA GAACGAGTGA CGAATCTTCA
CAGGTGAGGT TCGTAGCAAT TAGCGATCTC CCTTCATATA AAATGCATCC GTCGATCCGA
CTGCGAGTTG ATCATTATCT CGAAGAAAGG AGTGAACCGT ATATTGGCTG A
 
Protein sequence
MPRVDYLNDP EAPAANSIVP AVSAIVPDSE GRILLIRRTD NGYWAIPGGG VEPGESVRQA 
TAREVMEETG ISCEVTGVVG IYSNPGHVAA YDNGEVRQQF SICFRTRMTG GEPRTSDESS
QVRFVAISDL PSYKMHPSIR LRVDHYLEER SEPYIG