Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0130 |
Symbol | |
ID | 3903407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 160042 |
End bp | 161406 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877464 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_479253 |
Protein GI | 86738853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTGC TGATCGACCG GGTCGCCGGG TTGGACGTGC ACCGGGACAC GGTCGTGGCG GCGGTCCGGG TTGGCGGGCG TGGTGGCGGC CGGCGGGGGG AGGTGCGGAC CTTCGCCACG ACGGGAGCGG GACTGACCCG GCTGGCCGGG TGGCTGTCGG AACAGCGGGT TTCTCTGGTG GGTATGGAAT CCACGCCTGA CTACTGGCGC CCGTTCTACT ACCTGCTCGA GGCCCGCGGT CTCACGGTGT GGCTGGTTAA CGCCCGGGAC GTCAAGAACG TCCCGGGAAG ACCCAAAACG GACAAACTCG ACGCGATCTG GCTGGCCAAA CTCAACGAGC GTGGCATGCT ACGGCCCTCC TTCGTGCCGC CACCCGAGAT CCGCGAGATC CGTAACCTCA CCCGGCTGCG CCTGGACCTG ACCGCCGAGT GCACCCGGCA CCGGCTGCGG GTCGAGAAGC TCCTCGAGGA CGCCCTGATC AAACTGTCGA CGGTGCTGTC GGACATCTTC GGGGTCTCCG GTCGGGCGAT GCTCGACGCG CTCGTCGCGG GCGAACGTGA TCCGAAGAAG CTCGCGGCGC TTGCCCGCGG CCGGGTCAAG GCCACCCAGG CCGAGCTGGC GACCGCGCTG ACCGGCCAGT TCACCGAGCA CCACGGTTAC CTGCTCTCGG TGCTGCTCGC CCAGATCGAC GGCCTCGATC GGCGGATCGC CGAGCTCACC GAGCGGATCG ACACCGCGAT CGCCGCCCTG CCTGCCCCGG CCCACGCCGC CGCCGACGCC GCCCGCGGTG GCGAGACCGG CCCCGACGGG GACGCCACCA CCGGGACCGG CCAGGGCGGC GGTGGCGCCG CGGCCCGGCC CGGCCTGGAC ATCCTCGACC GGCTCGACGA GATCCCCGGC ATCGCCCGCC ACGCCGCCCA GGTGATCATC GCCGAGATCG GGACCGACAT GGCCCAGTTC CCGACCTCCG GCCACCTGAA CTCGTGGGCG AAACTGACCC CCCAGACGAT CCAGTCCGGC GCGAAAAGCC GCACCGGGCG CACCGGCAAG GGCAACCCCT ACCTGCGCGG CGCCCTCGGG GAGGCCGCCA TGGCGGCGGC GAAGACGAAG ACCTTCCTCG GCTCCCGCTA CCGGCGCCTC GTCAAACGCC GCGGCCATCT CAAGGCCCTC GTCGCCGTCG CCCGCTCCAT CCTGACCATC GTCTGGCATC TGCTGAACGA CCCCACCGCG CGGTTCCATG ACCTCGGAGT CGACTACCAC GCCAGCCTGC AGAGCAGGGA ACGCCGCAAG CGCAACGCCC TGCGCGAGCT CAAGAGCCTC AACCTGAGCG CACAGGAGAT CACCGCCCTG CTCGCCGCGG CCTGA
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Protein sequence | MDVLIDRVAG LDVHRDTVVA AVRVGGRGGG RRGEVRTFAT TGAGLTRLAG WLSEQRVSLV GMESTPDYWR PFYYLLEARG LTVWLVNARD VKNVPGRPKT DKLDAIWLAK LNERGMLRPS FVPPPEIREI RNLTRLRLDL TAECTRHRLR VEKLLEDALI KLSTVLSDIF GVSGRAMLDA LVAGERDPKK LAALARGRVK ATQAELATAL TGQFTEHHGY LLSVLLAQID GLDRRIAELT ERIDTAIAAL PAPAHAAADA ARGGETGPDG DATTGTGQGG GGAAARPGLD ILDRLDEIPG IARHAAQVII AEIGTDMAQF PTSGHLNSWA KLTPQTIQSG AKSRTGRTGK GNPYLRGALG EAAMAAAKTK TFLGSRYRRL VKRRGHLKAL VAVARSILTI VWHLLNDPTA RFHDLGVDYH ASLQSRERRK RNALRELKSL NLSAQEITAL LAAA
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