Gene Francci3_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0128 
Symbol 
ID3903404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp157382 
End bp157909 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content61% 
IMG OID637877461 
Producthypothetical protein 
Protein accessionYP_479251 
Protein GI86738851 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAGCA ACGCTGAGCG CGCAGCTCAT GACCTCCTCG CCCGTCATGC CGTCGCCGCT 
CCACCCGTGC CAGTCGACAA GATCGCAGCG GCCGAGGGGA TCTCCGTCGT TCAGGAACCG
TTCCGCGACG ACGAGGTCTC GGGCGTACTC CTCCGCGAGC CCGACCGGAC GATGATCATC
GTCAATGCGG CCAACGCTGT CGTCCGACAA AGATTCACTA TTGCCCATGA AATTGGACAC
TTCACGTTAC ATCGTGGAAC TGTCTACCTA GACGGACGCG CCCGCGTGAA CTTCCGGGAT
GGCCTGTCGT CTATGGCTAC AGACCAGGAA GAGATCGAGG CGAACTCATT CGCCGCAGCA
CTTCTCATGC CCACCAAATG GGTCAGAACA GCATTCGAGA CCACAGTCCG AAACAGCCCG
GTCGGCAGCG AGGAAGAGTT GGCCGGGCTG CTCGCTGGGC GCTTCGTCGT AAGCCGTCAA
GCGATGCTCT TCAGGCTCAT CTACCTCGGG CTTATTGCCG CACCTTAA
 
Protein sequence
MASNAERAAH DLLARHAVAA PPVPVDKIAA AEGISVVQEP FRDDEVSGVL LREPDRTMII 
VNAANAVVRQ RFTIAHEIGH FTLHRGTVYL DGRARVNFRD GLSSMATDQE EIEANSFAAA
LLMPTKWVRT AFETTVRNSP VGSEEELAGL LAGRFVVSRQ AMLFRLIYLG LIAAP