Gene Francci3_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0120 
Symbol 
ID3903450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp148289 
End bp149023 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID637877453 
Productresponse regulator receiver protein 
Protein accessionYP_479243 
Protein GI86738843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTAACCT ACCCTGGTGT CGTCGACCTG CCCGAGTCGA CCCTGACCTT CCTCGCGGGG 
CTGCTGGCCG AGGATCGCGC CCAGCGTCGG ACCTGGCGCA AGCTGCCCCC ACCCGAGCAG
GCACTCCTGG TGCTCGTCCA CCTCCGCAAG GGTGAACGCT ACGAGCAGCT CGCCGAGGGC
TTCCAGGTCA GTGTCGGCAC CGTCCACAAC TACATCCGCG AAGCCGTCCG CCTGCTCGCC
ACTCACGGCC GGACCCTGCT CGCCGCGGTC TGGATCTTCG CGTGGACCCA GAGCAACTTC
CTCATCCTCG ACGGCACCGT CGTGCGTACC AACCGTGTCC GCGCGCACAA CAAGCTGTAC
TACTCGGGCA AGCACAAGTA CCACGGCATC AACCTGCAGG GCCTCACCGA CCCCTACGGC
CGGCTGATCT GGATCTCCGA AGGGCTTCCC GGCTCCGTCC ATGACCTCAC CGCGGCCCGG
ATGCACGACA TTCTCGATCT GATCGACCGC TCGGAGCTCT ACCTCTACGC GGACAAGGGC
TACGTCGGCG GCGAGGGCGA CCGCCTCCTC GTCCCGATCA AGAAACCCAA GAACAACGAC
CTCCCCGACC GTGACAAGGA GGCCAACCGG ACCCACGCCA CCACCCGCTC ACAAGGCGAA
CGAGGATTCG CGGTCCTCAA GAACTGGCAC ATATTCGACC GTTTCCGTGG CTCTAGAGTT
TCGCAGTTTT CTTGA
 
Protein sequence
MLTYPGVVDL PESTLTFLAG LLAEDRAQRR TWRKLPPPEQ ALLVLVHLRK GERYEQLAEG 
FQVSVGTVHN YIREAVRLLA THGRTLLAAV WIFAWTQSNF LILDGTVVRT NRVRAHNKLY
YSGKHKYHGI NLQGLTDPYG RLIWISEGLP GSVHDLTAAR MHDILDLIDR SELYLYADKG
YVGGEGDRLL VPIKKPKNND LPDRDKEANR THATTRSQGE RGFAVLKNWH IFDRFRGSRV
SQFS