| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0114 |
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| Symbol | |
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| ID | 3903444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 140305 |
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| End bp | 141600 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637877447 |
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| Product | phage integrase |
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| Protein accession | YP_479237 |
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| Protein GI | 86738837 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.646267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTCTAC CTCCGGCGTG TCGCCGGTAT CCGTCCAGGT CAGACCATGC ATCGGCCGAT
GCCAAGAATG ATCAACTTGG CCTATCGACT ACGAAATGGC CCTGGGGCTC GATCTACCAG
CGCGAGAGCG ACGGGATGTG GGTGGGGGCT GCCTACGTCC TCATGCCCGA CGGAACGCAG
CGACGCCGGC CGGTATACGG GAAGACTGCC GACATCGTCC GCGAGAAGCT CACCAAGATG
CAGGCCCAGT CGGACCAGGG CATCCCAGCC GAGGCAACCG GGTGGACCAT GGAGCGGTTC
CTCACCTATT GGCTCAGCGA CATCGTGACG CCGGCTTGCA AACCGCGCAC GGTGCAGGGC
TACGAGGTCA TCGTCCGGAA CTACCTGATC CCGGCGATCG GCAAGAAGCG GCTGAACAAG
CTGAACGGCG TCGATGTGCG GAACCTGCTC AAGCGGGTGC GCGGCACCTG CCTGTGCTGC
CTGCACGGCA CCGACCGCCG CCGCCCTGTG AAGCAGCGTC GCTGCTGCGC CGTTGGGCGC
TGCTGCCACC AGGCGCCGTC CGCCCGGCTC GTGCAGCAGG TCCACAGCGT TCTGCGTAAC
GTCCTCGGCG CCGCAGTACG CGAGGAACTG GTCGGCCGCA ATGTCGCGAA GCTCGCGAAG
GTCTCCGGCC CGACCTACAA GGTGCACCGG GGGCTCAGCG CCGACCAGGC CAGCCACTTG
CTCAAGGCCG CCGCGCACGA CCGGCTATAC GCGCTCTACG TCCTGGCCCT GTACCTGGGG
CTGCGGCGAG GGGAGATCCT TGGCCTGCGC TGGGAGGACA TCGACTTCGA GGACGAGACC
CTTGCCGTGC GGCACTCGTT GCAGCGGGTC GGTGGGCATC TGAGGGTGGT AGCGCCGAAG
ACGCGGACCT CGGAGCGAAC CCTGCCGCTG CTGCCGCTGA TCGCGAAGGT CCTGCGCGAG
CACCAGGCAC GGCAGGACGC GGAACGCGAG ACAGCCGATG TGAACTGGCG GGAGACTGGC
TTCGTGTTCA CCACGGCGAT TGGTACGCCG ATCGAGCCGG ACAACCTTCG ACGTAGCTGG
CTGCCGCTGT GCGGCGTACT CGGCTTGGAG GGCGTGCGCT TCCACGACAT CCGCCACACC
TGCGTCACGC TGCTGCTGAA CGCGGGCGTG CCCCCGCACG TCGTCCGCGA GATCGCGGGG
CACTCCGCGA TCGACGTTAC GATGGAGATC TATGCCCATG CCTCGCTGGA CGACAAGCGG
GCGGCGCTCC AGAAGCTCGT CGACGAGCTG GCGTAG
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| Protein sequence | MRLPPACRRY PSRSDHASAD AKNDQLGLST TKWPWGSIYQ RESDGMWVGA AYVLMPDGTQ
RRRPVYGKTA DIVREKLTKM QAQSDQGIPA EATGWTMERF LTYWLSDIVT PACKPRTVQG
YEVIVRNYLI PAIGKKRLNK LNGVDVRNLL KRVRGTCLCC LHGTDRRRPV KQRRCCAVGR
CCHQAPSARL VQQVHSVLRN VLGAAVREEL VGRNVAKLAK VSGPTYKVHR GLSADQASHL
LKAAAHDRLY ALYVLALYLG LRRGEILGLR WEDIDFEDET LAVRHSLQRV GGHLRVVAPK
TRTSERTLPL LPLIAKVLRE HQARQDAERE TADVNWRETG FVFTTAIGTP IEPDNLRRSW
LPLCGVLGLE GVRFHDIRHT CVTLLLNAGV PPHVVREIAG HSAIDVTMEI YAHASLDDKR
AALQKLVDEL A
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