Gene Francci3_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0092 
Symbol 
ID3905136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp110569 
End bp114177 
Gene Length3609 bp 
Protein Length1202 aa 
Translation table11 
GC content75% 
IMG OID637877422 
Producthypothetical protein 
Protein accessionYP_479215 
Protein GI86738815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGACC CGATCCCCCG CCCTGCCGGG CAGGAAGACG AGTATGGACG GGTGCCAGTG 
ACGATCCCGC GCGCTCCCGC CGACGAGTAC GCAACCGCCG CGATCCGGCA GCGGGTTCTT
GACGCCTGGG CCGCCTCCCC GGCCCGCTTC CGGGAAGACG CCAATGCCGA GGAGGACGCG
GCTCTCGGCG CCTACCGCGA CCGCCTCGTC GTCGAACTTG TGCAGAACGC GGTCGACGCC
GCGCGTGAGG CCGGCGTCCC GGCCCGGGTG TACCTGCGGC TGCGCACCTC CGCTTCGGAG
TCGGATGCTC CGGATGCTTC GAAGACCGGC GCCGGTCCCG GGGGCCTGCT GGAGATCGCC
AACACGGGGG CACCGCTGAG CCCGGCGGGG GTGGAGGCGC TGTCGACCCT GCGTGCCTCG
GCGAAACGGG ACACCACGTC GGTAGGGCGG TTCGGCGCCG GGTTCGCCGC AGTGCTCGCG
GTGAGCGACG ATCCCTCGAT CGTCTCCCGG TCCCGCCCGG GCGGGAGGGC GTCCGGAGTC
ACCTGGTCGA AGAGCAGGGT GATCAAGGCC GTGACGGCCG CGGGGGTGGG CTGCGCCGGC
ACCACGACGC CGGCGCCGGG CCTGACCGAA GAACTGGCCC GGCGCGACGG GGCGGTACCC
ATCCTCCGGC TGCCATTCGA TCTTCCCGCG CCGCCCGCAC CGCCGGACGG GTACGACACC
GTGATCCGCC TCCCGCTGCG GGACGTCGCG GCGGCCACGG CGGCCCGGGA TCTGCTGGCC
GGGCTCGATC CGACCCTGCC GCTCGTCCTC GGCGGTCCCA GCGAGATCGT GGTTGACGTC
GACGGAGCCG TTCGGACGAT CACCTGTCGA TGGATCCGCG GGGGCGGCTC ATCCCAGCCC
GCGCCGGGCG TGACGGCGAC CCGCGTGGAG ATCGCCGATC TCGACGGCGA GCGCTGGCGC
GGCATCGCCC GTAGCGGCGT GATCCCGGCC AACCTGCTGG CCGACCGCCC GGTAGAGGAG
CGCGGCCGGA ACCGCTTCAC CGCCCGGGTC ATGGTCCGCG ACGGCGGATG GCCCGAGGGC
GTCGCCCGGG TCGTGCGGGC ACCTCAGCCG ACGGACGAAC CGATCTCGCT GCCGATCCTG
GCGAGCGTCG AGCTGCCACT GGATCCCTCG CGTCGACACA CGGTATCGGG TCCGTTACGA
GACTGGCTCA CCGATCAGCT GAGCGCGGCC ACCGTGGCGC TGGCCGAATA CCTGGGCGCC
GGCAGGAACC CAGACGCCGG CAGGAACCCA GACGCCGGCA GGAACCCAGA CGCCGGCAGG
AACCCAGACG AGACACCCGG CGACCCGCTG GCCGCGCTGG CCCTCGTGCC GACGGGGCTG
CCGGTGGGCG AAGTCGACGG CAGGCTACGG GACGTGCTGA CCCGACTTCT CCCGGACGCG
GCGATGCTGC CCGCCGGTCT GCGTGGCCGG GACTGTTCCG TCTGCGATCT CGGCCCCGCG
ACCGATGCGG TCACCGAGCT GCTGCGCTCC TGCGGAGCCG ACCCGGCCGA GGCCTGGACC
GAGGCCGACC CGGCCGAGAT CGCCGGCACG GACGGGGCGG GTCCGGATAG CGACGACACC
GTCGCGGCGA AGGTCGATGG GCAGGTTCCC GGCCTGCTCC CGGCGGCCTA TGCGGCCCGC
CGGTGGCGTA CCGCACTCTC CGCCCTGGGC GTTCGACGGG TGGACAGCGC CGCCCTAGTC
GAGCTGCTCT CCGGGGTGCC CCGCCCGCCA CACTGGTGGG GACGTCTCTA TCCGCTCCTG
GTCGGGGCGC CGGACCGGGA TGCGCTCGGC GCGCTTCCGG TACCGGTCAC GGAGGTTCCC
GCGCCCTGGG AGGACACCGA GCCGCGCGGG GCAGCCGGGT CCAGCGCCTT GCGGACGCGG
ATGGTCACCG GTCCGCGTGG GACCCTGCTG CCCACCGCCG ACCTCGACAT CGTCGCGCTG
GCCCGATCGG GGCTGCCGCT GCGGGTCGTG CATCCCGACG CCTGCGCCCA GGACGCGGCG
CGGGATGCCC TGCGCACCCT CGGCGCGCTT GAGGGCACTC CAGCGGGTGT CCTAAGGGAT
GCGGCGGTAC GCGAGGCGGT CCTGGACGCC GATCCGGAGG ACGATCCCGA TGATCTCACC
GCCCTGGCGA ACGCGGTGCT GGCGCTGGTC CGGGACGCGG GCGAGGAGTC CGCGGCCGAC
CTGAGCTGGC TCGACGAGCT GCTGCTGCCG GACGGCGACG GTGACTTCAC CCCGGCCGGC
GAGCTGCTGA TCCAGGGAGG CCCCCTGGAT CGGGTGCTCG CCGAGGACGC GCCCTTCGGC
ACCCTGAGCG CCGAGGTCGC GCGGGCCTGG CCCGCCGAGG TACTGGCGAA GGTCGGTGTG
CTGCGCACCT TCGGGGTGTT GCACGCCCAC GACCTGCCGT TGGATCCCGA CGAGCAGATC
CTGCTTGACC TCGACGACAG CGACATCTGG GTTGACGACG TCGCGGCGGA CGACCACGGC
GCGCCGGGCG GCTCGGCGAA CCTGCGTCGG CCGCCTCCCG GCGGGCCACC GGCACCCGCC
ATGATCGGGG TGTTCGCGGC GGTACGCGAC CTCGAACTCG TCGACCGGAC CGCCTGGCCC
GAGGCGCTCG CCGAGCTCGC CCGACCACCG TTGCGGGACA TCGTGTTCGC CCCCGAGCCG
TCCTATACGC GCTGGTGGCT GGCGCGGCAC GCGGTGCTGC CCGTCGGTGG CGACGGCCGG
GTGCCCCGCT CCGCGGAACA CCCGGCGGAG CGCTCCGCGG AACACCCGGC GCACCGGGAC
AGCAGGGTTC TGCCTCCGGG CGAGCTCGTC CTACCCGACG CGGACCCCCT GCTCACCGGG
CTGTTCGCGC CGGCGGCACC GCTCCCGGGG GTCGACGACG AGTTCCTGCG CCACCTCGGC
TGCCGGCTGA CGCTGGAGGA CGTCCTCGGC GACCTGGGCG CGGTGATGGA CCTGCTCGAC
CGGCTGGGCG ACGTTGACCG GGACGTGCCG TGGCCCGCGG CTCGCACGCT GTACATCGCC
GCGGTCGACG CGGTGGCCCG GGTCCTGACG GCGCCGGACG GTTCCGCCCA CGACGGGCGG
TTCGACCCGC CGCTGACCGT CCGCACCCCG GACGGCGTCC GGGCCTGCGC CGACGTCGTC
GTGGTGGACG CACCGGACAT GCTGGGGCTG CTCGGCGCGG ACCGCTTCGG GCTGCGTCTC
CCGCTGGACC GGGCGGCCGA GGTGGCCCAC GTCCTCGGCG TGCGCCTCAC CGCCGAGGCG
GGCACCTGCG AGATCGCCTC GGCGGGCCCC GGCGAGGCCC GGCAGGCACC GGACGGCACA
CCGTACCGGG TTCACGACCC GCTGCTGGTC GAGGATCTCG CCGGCAGGCC AACCCGGGTG
CCCTGGCGGG TACTCGGCGG GATCGGCGGC GAGATCCACG TGGATGCCGA GGCCGGCTCG
GACGCGCTCG CGCGGGCCCT GGCCTGGCGC GGCGGGCAGT GGGACCGGCG GCATGCGCTG
GCCGCGGCGC TGCGCGACCC CGACGGTGCC GCCTTCCGAG CCGCGGAGGA CGACCTCGAC
GAGACCTGA
 
Protein sequence
MPDPIPRPAG QEDEYGRVPV TIPRAPADEY ATAAIRQRVL DAWAASPARF REDANAEEDA 
ALGAYRDRLV VELVQNAVDA AREAGVPARV YLRLRTSASE SDAPDASKTG AGPGGLLEIA
NTGAPLSPAG VEALSTLRAS AKRDTTSVGR FGAGFAAVLA VSDDPSIVSR SRPGGRASGV
TWSKSRVIKA VTAAGVGCAG TTTPAPGLTE ELARRDGAVP ILRLPFDLPA PPAPPDGYDT
VIRLPLRDVA AATAARDLLA GLDPTLPLVL GGPSEIVVDV DGAVRTITCR WIRGGGSSQP
APGVTATRVE IADLDGERWR GIARSGVIPA NLLADRPVEE RGRNRFTARV MVRDGGWPEG
VARVVRAPQP TDEPISLPIL ASVELPLDPS RRHTVSGPLR DWLTDQLSAA TVALAEYLGA
GRNPDAGRNP DAGRNPDAGR NPDETPGDPL AALALVPTGL PVGEVDGRLR DVLTRLLPDA
AMLPAGLRGR DCSVCDLGPA TDAVTELLRS CGADPAEAWT EADPAEIAGT DGAGPDSDDT
VAAKVDGQVP GLLPAAYAAR RWRTALSALG VRRVDSAALV ELLSGVPRPP HWWGRLYPLL
VGAPDRDALG ALPVPVTEVP APWEDTEPRG AAGSSALRTR MVTGPRGTLL PTADLDIVAL
ARSGLPLRVV HPDACAQDAA RDALRTLGAL EGTPAGVLRD AAVREAVLDA DPEDDPDDLT
ALANAVLALV RDAGEESAAD LSWLDELLLP DGDGDFTPAG ELLIQGGPLD RVLAEDAPFG
TLSAEVARAW PAEVLAKVGV LRTFGVLHAH DLPLDPDEQI LLDLDDSDIW VDDVAADDHG
APGGSANLRR PPPGGPPAPA MIGVFAAVRD LELVDRTAWP EALAELARPP LRDIVFAPEP
SYTRWWLARH AVLPVGGDGR VPRSAEHPAE RSAEHPAHRD SRVLPPGELV LPDADPLLTG
LFAPAAPLPG VDDEFLRHLG CRLTLEDVLG DLGAVMDLLD RLGDVDRDVP WPAARTLYIA
AVDAVARVLT APDGSAHDGR FDPPLTVRTP DGVRACADVV VVDAPDMLGL LGADRFGLRL
PLDRAAEVAH VLGVRLTAEA GTCEIASAGP GEARQAPDGT PYRVHDPLLV EDLAGRPTRV
PWRVLGGIGG EIHVDAEAGS DALARALAWR GGQWDRRHAL AAALRDPDGA AFRAAEDDLD
ET