Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0092 |
Symbol | |
ID | 3905136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 110569 |
End bp | 114177 |
Gene Length | 3609 bp |
Protein Length | 1202 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637877422 |
Product | hypothetical protein |
Protein accession | YP_479215 |
Protein GI | 86738815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGGACC CGATCCCCCG CCCTGCCGGG CAGGAAGACG AGTATGGACG GGTGCCAGTG ACGATCCCGC GCGCTCCCGC CGACGAGTAC GCAACCGCCG CGATCCGGCA GCGGGTTCTT GACGCCTGGG CCGCCTCCCC GGCCCGCTTC CGGGAAGACG CCAATGCCGA GGAGGACGCG GCTCTCGGCG CCTACCGCGA CCGCCTCGTC GTCGAACTTG TGCAGAACGC GGTCGACGCC GCGCGTGAGG CCGGCGTCCC GGCCCGGGTG TACCTGCGGC TGCGCACCTC CGCTTCGGAG TCGGATGCTC CGGATGCTTC GAAGACCGGC GCCGGTCCCG GGGGCCTGCT GGAGATCGCC AACACGGGGG CACCGCTGAG CCCGGCGGGG GTGGAGGCGC TGTCGACCCT GCGTGCCTCG GCGAAACGGG ACACCACGTC GGTAGGGCGG TTCGGCGCCG GGTTCGCCGC AGTGCTCGCG GTGAGCGACG ATCCCTCGAT CGTCTCCCGG TCCCGCCCGG GCGGGAGGGC GTCCGGAGTC ACCTGGTCGA AGAGCAGGGT GATCAAGGCC GTGACGGCCG CGGGGGTGGG CTGCGCCGGC ACCACGACGC CGGCGCCGGG CCTGACCGAA GAACTGGCCC GGCGCGACGG GGCGGTACCC ATCCTCCGGC TGCCATTCGA TCTTCCCGCG CCGCCCGCAC CGCCGGACGG GTACGACACC GTGATCCGCC TCCCGCTGCG GGACGTCGCG GCGGCCACGG CGGCCCGGGA TCTGCTGGCC GGGCTCGATC CGACCCTGCC GCTCGTCCTC GGCGGTCCCA GCGAGATCGT GGTTGACGTC GACGGAGCCG TTCGGACGAT CACCTGTCGA TGGATCCGCG GGGGCGGCTC ATCCCAGCCC GCGCCGGGCG TGACGGCGAC CCGCGTGGAG ATCGCCGATC TCGACGGCGA GCGCTGGCGC GGCATCGCCC GTAGCGGCGT GATCCCGGCC AACCTGCTGG CCGACCGCCC GGTAGAGGAG CGCGGCCGGA ACCGCTTCAC CGCCCGGGTC ATGGTCCGCG ACGGCGGATG GCCCGAGGGC GTCGCCCGGG TCGTGCGGGC ACCTCAGCCG ACGGACGAAC CGATCTCGCT GCCGATCCTG GCGAGCGTCG AGCTGCCACT GGATCCCTCG CGTCGACACA CGGTATCGGG TCCGTTACGA GACTGGCTCA CCGATCAGCT GAGCGCGGCC ACCGTGGCGC TGGCCGAATA CCTGGGCGCC GGCAGGAACC CAGACGCCGG CAGGAACCCA GACGCCGGCA GGAACCCAGA CGCCGGCAGG AACCCAGACG AGACACCCGG CGACCCGCTG GCCGCGCTGG CCCTCGTGCC GACGGGGCTG CCGGTGGGCG AAGTCGACGG CAGGCTACGG GACGTGCTGA CCCGACTTCT CCCGGACGCG GCGATGCTGC CCGCCGGTCT GCGTGGCCGG GACTGTTCCG TCTGCGATCT CGGCCCCGCG ACCGATGCGG TCACCGAGCT GCTGCGCTCC TGCGGAGCCG ACCCGGCCGA GGCCTGGACC GAGGCCGACC CGGCCGAGAT CGCCGGCACG GACGGGGCGG GTCCGGATAG CGACGACACC GTCGCGGCGA AGGTCGATGG GCAGGTTCCC GGCCTGCTCC CGGCGGCCTA TGCGGCCCGC CGGTGGCGTA CCGCACTCTC CGCCCTGGGC GTTCGACGGG TGGACAGCGC CGCCCTAGTC GAGCTGCTCT CCGGGGTGCC CCGCCCGCCA CACTGGTGGG GACGTCTCTA TCCGCTCCTG GTCGGGGCGC CGGACCGGGA TGCGCTCGGC GCGCTTCCGG TACCGGTCAC GGAGGTTCCC GCGCCCTGGG AGGACACCGA GCCGCGCGGG GCAGCCGGGT CCAGCGCCTT GCGGACGCGG ATGGTCACCG GTCCGCGTGG GACCCTGCTG CCCACCGCCG ACCTCGACAT CGTCGCGCTG GCCCGATCGG GGCTGCCGCT GCGGGTCGTG CATCCCGACG CCTGCGCCCA GGACGCGGCG CGGGATGCCC TGCGCACCCT CGGCGCGCTT GAGGGCACTC CAGCGGGTGT CCTAAGGGAT GCGGCGGTAC GCGAGGCGGT CCTGGACGCC GATCCGGAGG ACGATCCCGA TGATCTCACC GCCCTGGCGA ACGCGGTGCT GGCGCTGGTC CGGGACGCGG GCGAGGAGTC CGCGGCCGAC CTGAGCTGGC TCGACGAGCT GCTGCTGCCG GACGGCGACG GTGACTTCAC CCCGGCCGGC GAGCTGCTGA TCCAGGGAGG CCCCCTGGAT CGGGTGCTCG CCGAGGACGC GCCCTTCGGC ACCCTGAGCG CCGAGGTCGC GCGGGCCTGG CCCGCCGAGG TACTGGCGAA GGTCGGTGTG CTGCGCACCT TCGGGGTGTT GCACGCCCAC GACCTGCCGT TGGATCCCGA CGAGCAGATC CTGCTTGACC TCGACGACAG CGACATCTGG GTTGACGACG TCGCGGCGGA CGACCACGGC GCGCCGGGCG GCTCGGCGAA CCTGCGTCGG CCGCCTCCCG GCGGGCCACC GGCACCCGCC ATGATCGGGG TGTTCGCGGC GGTACGCGAC CTCGAACTCG TCGACCGGAC CGCCTGGCCC GAGGCGCTCG CCGAGCTCGC CCGACCACCG TTGCGGGACA TCGTGTTCGC CCCCGAGCCG TCCTATACGC GCTGGTGGCT GGCGCGGCAC GCGGTGCTGC CCGTCGGTGG CGACGGCCGG GTGCCCCGCT CCGCGGAACA CCCGGCGGAG CGCTCCGCGG AACACCCGGC GCACCGGGAC AGCAGGGTTC TGCCTCCGGG CGAGCTCGTC CTACCCGACG CGGACCCCCT GCTCACCGGG CTGTTCGCGC CGGCGGCACC GCTCCCGGGG GTCGACGACG AGTTCCTGCG CCACCTCGGC TGCCGGCTGA CGCTGGAGGA CGTCCTCGGC GACCTGGGCG CGGTGATGGA CCTGCTCGAC CGGCTGGGCG ACGTTGACCG GGACGTGCCG TGGCCCGCGG CTCGCACGCT GTACATCGCC GCGGTCGACG CGGTGGCCCG GGTCCTGACG GCGCCGGACG GTTCCGCCCA CGACGGGCGG TTCGACCCGC CGCTGACCGT CCGCACCCCG GACGGCGTCC GGGCCTGCGC CGACGTCGTC GTGGTGGACG CACCGGACAT GCTGGGGCTG CTCGGCGCGG ACCGCTTCGG GCTGCGTCTC CCGCTGGACC GGGCGGCCGA GGTGGCCCAC GTCCTCGGCG TGCGCCTCAC CGCCGAGGCG GGCACCTGCG AGATCGCCTC GGCGGGCCCC GGCGAGGCCC GGCAGGCACC GGACGGCACA CCGTACCGGG TTCACGACCC GCTGCTGGTC GAGGATCTCG CCGGCAGGCC AACCCGGGTG CCCTGGCGGG TACTCGGCGG GATCGGCGGC GAGATCCACG TGGATGCCGA GGCCGGCTCG GACGCGCTCG CGCGGGCCCT GGCCTGGCGC GGCGGGCAGT GGGACCGGCG GCATGCGCTG GCCGCGGCGC TGCGCGACCC CGACGGTGCC GCCTTCCGAG CCGCGGAGGA CGACCTCGAC GAGACCTGA
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Protein sequence | MPDPIPRPAG QEDEYGRVPV TIPRAPADEY ATAAIRQRVL DAWAASPARF REDANAEEDA ALGAYRDRLV VELVQNAVDA AREAGVPARV YLRLRTSASE SDAPDASKTG AGPGGLLEIA NTGAPLSPAG VEALSTLRAS AKRDTTSVGR FGAGFAAVLA VSDDPSIVSR SRPGGRASGV TWSKSRVIKA VTAAGVGCAG TTTPAPGLTE ELARRDGAVP ILRLPFDLPA PPAPPDGYDT VIRLPLRDVA AATAARDLLA GLDPTLPLVL GGPSEIVVDV DGAVRTITCR WIRGGGSSQP APGVTATRVE IADLDGERWR GIARSGVIPA NLLADRPVEE RGRNRFTARV MVRDGGWPEG VARVVRAPQP TDEPISLPIL ASVELPLDPS RRHTVSGPLR DWLTDQLSAA TVALAEYLGA GRNPDAGRNP DAGRNPDAGR NPDETPGDPL AALALVPTGL PVGEVDGRLR DVLTRLLPDA AMLPAGLRGR DCSVCDLGPA TDAVTELLRS CGADPAEAWT EADPAEIAGT DGAGPDSDDT VAAKVDGQVP GLLPAAYAAR RWRTALSALG VRRVDSAALV ELLSGVPRPP HWWGRLYPLL VGAPDRDALG ALPVPVTEVP APWEDTEPRG AAGSSALRTR MVTGPRGTLL PTADLDIVAL ARSGLPLRVV HPDACAQDAA RDALRTLGAL EGTPAGVLRD AAVREAVLDA DPEDDPDDLT ALANAVLALV RDAGEESAAD LSWLDELLLP DGDGDFTPAG ELLIQGGPLD RVLAEDAPFG TLSAEVARAW PAEVLAKVGV LRTFGVLHAH DLPLDPDEQI LLDLDDSDIW VDDVAADDHG APGGSANLRR PPPGGPPAPA MIGVFAAVRD LELVDRTAWP EALAELARPP LRDIVFAPEP SYTRWWLARH AVLPVGGDGR VPRSAEHPAE RSAEHPAHRD SRVLPPGELV LPDADPLLTG LFAPAAPLPG VDDEFLRHLG CRLTLEDVLG DLGAVMDLLD RLGDVDRDVP WPAARTLYIA AVDAVARVLT APDGSAHDGR FDPPLTVRTP DGVRACADVV VVDAPDMLGL LGADRFGLRL PLDRAAEVAH VLGVRLTAEA GTCEIASAGP GEARQAPDGT PYRVHDPLLV EDLAGRPTRV PWRVLGGIGG EIHVDAEAGS DALARALAWR GGQWDRRHAL AAALRDPDGA AFRAAEDDLD ET
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