| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0079 |
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| Symbol | |
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| ID | 3905123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 97224 |
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| End bp | 98060 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637877409 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_479202 |
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| Protein GI | 86738802 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCCCAG CCTCCGCTGC CGACGAGCCG CCGGTGGGCG GTCCGGACCC GGACGTCCCC
GATCTGGACG TCCCCGATCC CGCCCTGCTC CGCCAGGGCT ACCGCGCCGG TCGTCTGGAG
CCGGAGCATC TCGCGCCGAC CTGGGTCGAA CAGTTCGCCG CCTGGTTCAT CGACGCGGCC
ACCCCCGGGG TAGGCGTTCC GGAGGCCAAC GCGGCCGTGT TCGCGACGGC ATCCGCCGCT
GGGCGGCCCA GTGCCAGGAC CGTGCTGCTC AAGGGGTTCG ACCAGCGGGG CTTCGTGATC
TACACGAACT ACGCCTCGCG CAAGGGCCGT GAGGCCACCG AGAACCCCTT CGGCTCGCTG
GTCTTCCCCT GGTACGCCCT CGAGCGCCAA GTCGTCGTCA TCGGATCGAT CGAGCGCGTG
AGCCGGGCCG AGACGGAACG CTACTTCCAG TCGCGTCCGC ATGGTTCGCA GCTCGGCGCC
TGGGCCAGCC ACCAGTCGAC GATCATCGAG TCCCGTACGG TGCTCGACGA CCGCGCCGCC
GAGCTCGCGG CCCGTTGGCC CGAGGGCACC CGGGTGCCGA CACCGGAGTT CTGGGGTGGG
CTACGCATCG TGCCGGACAC CGTGGAGTTC TGGCAGGGCC GCGCGGACCG GCTGCACGAC
CGGCTGCGGT ACCGGCGGGT GTCGGTACCG GCCGACGGCG GCGGCACGGA CTCCCTCGCC
GTCGCCGACC CGGACGCCAC CGGTGTCCGG GTCGGCGATG CGGGCGGCGG CGATGCGGGC
GGCGGCGTCC CGACCGCGGC CGAAGATCTC TGGGTCGTCG AACGCCTCGC CCCTTGA
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| Protein sequence | MAPASAADEP PVGGPDPDVP DLDVPDPALL RQGYRAGRLE PEHLAPTWVE QFAAWFIDAA
TPGVGVPEAN AAVFATASAA GRPSARTVLL KGFDQRGFVI YTNYASRKGR EATENPFGSL
VFPWYALERQ VVVIGSIERV SRAETERYFQ SRPHGSQLGA WASHQSTIIE SRTVLDDRAA
ELAARWPEGT RVPTPEFWGG LRIVPDTVEF WQGRADRLHD RLRYRRVSVP ADGGGTDSLA
VADPDATGVR VGDAGGGDAG GGVPTAAEDL WVVERLAP
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