| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0069 |
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| Symbol | |
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| ID | 3905404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 86820 |
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| End bp | 88559 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637877399 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_479192 |
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| Protein GI | 86738792 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCGC GTCTCCCCTT CAGCAGTAGC GCCGAGGCCG CCCCCGGGGG CGGCGGCAGG
GAGGGGTCCG GCGCCGGGCA TGACTCCCCC TCCCCCTGGG CTCCGCCCAT CGGCAGCGCG
GCCGGGACAC CAGCCGGCCA AGCTCACCCG GCTGGTCCCG CCAGCTCCGA ACCCGACCTC
CCGGCGGGCC CGCCTTCCCG TCCGCCCGGC TCGCCGTACA GCCAACCGCC GGCGCTGGGG
CCATCCTCCG GCCAGCATCC TCAGTATCCG AATCCCCATC CCCCGCATGG GGATCCTCGT
CCGTATCCGG ATTCTCCGTA CCCGGCCGGG CCGTCCCAGG CCAGCCAGCA GCAGGCCGCG
TTCTCCGCGG GAAGCCCACC TCCGGCGGCG CCGCCCGGCG GCCCGTGGGG ACCACCTTCA
GGCCCGCCAC CCAGTGGTCC CGCTGCCCCG AGAGCTCTGA ACGGCGCGGC CGGCCCCGCG
GGCCCCCCCG CGGGACCCCC GACCGGAGGG CATTCCTGGG GACCGCCGTG GAGTTCCCCG
AGCGGCGCCG GCTCGCCACC CGCCCAGGAC CTCTACGGCA ACGGGACAAC CATGGCCGCC
TCGCCGCCTT GGCGCCGACG GCGGCTCGTC GCCGCCGGAC TCGCCATTGC CCTGGTCTCA
GCTGGTGTAG GTGGCGGTGT CGGAGCGCTG GTCGCCGATA ACAACGGGGG GCAGACCATC
GTCACATCCG CCGGTCTGCA CAACACCGTG GACAGTTCCG GTGGAACGTC GCCGGCAGCC
GCGAACACCG TGTCGGCCGC GGCGCAGAAG ATCCTGCCGA GTGTCGTGAC AATCTCCGAG
GAATCGAGCA GCGAGTCGGG CACCGGCTCC GGCACCATCA TCCGTTCGGA CGGGCATATC
CTGACGAACA ACCATGTGGT CTCGGGTGCC GCGAACGGCG GTTCGCTGAC GGTCACCCTG
CAGGACGGTC GTACCTTCGA TGCGCAGGTC GTAGGCACGG ATCCGAGCTC GGACCTCGCG
ATGATCAAAA TCAATGCCAC CGGTCTCACT GCGGCCACGT TCGGCAATTC CGACACGCTG
AACATCGGGG AACTGGTGGT AGCGGTCGGC AGTCCGCTCG GGCTGAACGG TACGGTCACG
TCCGGCATCG TCAGTGCCGT GCATCGCCCG GTGCGCACCG GGGATTCAAC CGTGCGGGAT
CAGCAGAACA CCGTGCTCGA CGCAATCCAG ACCGACGCAT CGATCAACCC CGGTAACTCC
GGTGGTCCGC TGGTCAACAG TCGCGGCGAG ATCATCGGCG TGAACAGCGC GATCGCGACC
GTGGGTGGTG GAAGTCCCTT CGGTGGCGGC CAGCAGTCCG GCAACATCGG CGTCGGTTTC
GCTATTCCGG GCAACTATGC CGAGTCGGTG GCCACCCAGT TGATCTCCAC GGGAAGCGCC
CGGCACCCGT ACCTGGGCGT CAGCGCCTCC ACCGCGGAGG AGAACACCCG CTCCACCGCC
TCCAGCGGCA ACGGTGCACA GATCCGCTCC ATGGTTCCGG GTGGACCCGC CGAAAGGGCC
GGCCTTCGCA CCGGCGACGT CATCACGAAG GTCGGCAACC GTGCCGTCAA CGACGTCGAC
TCCCTCATCG CGGCGGTCCG GTCCCACGCC ATCGGCGACG AGGTGGAAGT GACCTATACC
CGTGATGGAC AGAGCGGCAC CGTCAAGGCC CGGCTCGCCC AACAACCACC GGCATCCTGA
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| Protein sequence | MTPRLPFSSS AEAAPGGGGR EGSGAGHDSP SPWAPPIGSA AGTPAGQAHP AGPASSEPDL
PAGPPSRPPG SPYSQPPALG PSSGQHPQYP NPHPPHGDPR PYPDSPYPAG PSQASQQQAA
FSAGSPPPAA PPGGPWGPPS GPPPSGPAAP RALNGAAGPA GPPAGPPTGG HSWGPPWSSP
SGAGSPPAQD LYGNGTTMAA SPPWRRRRLV AAGLAIALVS AGVGGGVGAL VADNNGGQTI
VTSAGLHNTV DSSGGTSPAA ANTVSAAAQK ILPSVVTISE ESSSESGTGS GTIIRSDGHI
LTNNHVVSGA ANGGSLTVTL QDGRTFDAQV VGTDPSSDLA MIKINATGLT AATFGNSDTL
NIGELVVAVG SPLGLNGTVT SGIVSAVHRP VRTGDSTVRD QQNTVLDAIQ TDASINPGNS
GGPLVNSRGE IIGVNSAIAT VGGGSPFGGG QQSGNIGVGF AIPGNYAESV ATQLISTGSA
RHPYLGVSAS TAEENTRSTA SSGNGAQIRS MVPGGPAERA GLRTGDVITK VGNRAVNDVD
SLIAAVRSHA IGDEVEVTYT RDGQSGTVKA RLAQQPPAS
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