Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0067 |
Symbol | |
ID | 3905402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 83126 |
End bp | 84502 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637877397 |
Product | HNH endonuclease |
Protein accession | YP_479190 |
Protein GI | 86738790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGATGG TCCCATCGCG CGCCATAATC GAACACATGT TCGGTAAAGA TCTGGAGACG GTTCCCCTCC CTGCCCTCGA GACGGAACTC TGCAGCTGGG CGGGTCGACT GGCTGCCGCC ACCTGCCGTT GGCTGATTCT GCTCGCTGCC TTCGATCGCC GCAAAGGTTG GTCCGCCAGC GGCATGCCGA CCTGCGCGCA CTGGTTGTCC TGGCGGTGCG GACTCGGACT TCGCGCCAGC TACGACTACC TTCGAGTCGC CCGAGCACTA GAACTCCTTC CCCTCATTCG CGAGTCCTTC TCCAAAGGAG AGATCTCCTA TTCAAAGGTT CGGGCTATAA CACGTGTCGC CGAGCCGGAG ACGGAAGCAA GGTGGGTTGA GCAGGCCGCA CAGTGCACAG CGCAGAAGCT CGAGAGACTC GTGTCCTTGC ATGCCAAAAT CAATCATGAT CAAAAAGATG AGAACGGGGG GCGCGACGAA GATGGCCCGA ACAATACGCG GTGCTCTTGG CGGTGGAACG AAGATGGAAC ATTTTCACTG TCCGTCCGCC TCGATCCAGC CCGTGGTGCG ATCATTGAGA GCGCTCTCGT CATGGCCATG TCAAGCCTGC ACGACTCCCG AGACTCTAAC CGGGAAGATT CTTCCACGAC ATCCGATGCC GAGGGCTCGA TCAATGACAC CTCGATAACA CACGCAGGTC CTGAGATGAA AGCCGATGCC TTGACGGCTA TGTCCGAATC TTTCCTCTCC ACCGGCGCTC CCACGCTGAT GAGCTCCACA TCTCACACGA TAAATGTACA CATAGATATT GATACACTTA TCGGTTCAAG CCGAGAGAAC CATGGATCCC CCCTCCAGCG ACATGAAGGG AATGGACTGA ATACCCGAAG GTGTGATGTG AAGGACCATA TCCCCGTTCT ACCGAACGTC GTTCGAAGAC TGTCCTGCGA CAGCCTCCTT CGGACACTTA TTATAGACTC CAAGGGAAAC CCTCTCATGC TGGGTCGCAC CCGCCGAAAC CCAACCACGA GATTGCGGCT AGCAATTTAT GCACGCGACC GAGGGGTATG CCAGTATCCG GGCTGCCATC ATACCCGCTG GCTCCAGGTA CATCATATGA AGGAATGGGC ATCCGGAGGC GGAAATACAG ATCTTGATAA TCTCGTTCTG ATCTGCTCCC TTCATCATCG GACTATTCAT GAAAGGCGGA TTGTTCTGCA GCGCGGACGC GACGGTTCGA TTGTCGCCCG CCATCGTGAC GGAACGCTGA TGCAGCAGGC GCCACGGCTG CATCTGGGTC CGGATCTGTT GGAGCTCCTC AGCGATAACA CCTCAGCCGC GCCAGCTGAG ACCGTCCCGA CAAGACGAGT AGCCTGA
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Protein sequence | MTMVPSRAII EHMFGKDLET VPLPALETEL CSWAGRLAAA TCRWLILLAA FDRRKGWSAS GMPTCAHWLS WRCGLGLRAS YDYLRVARAL ELLPLIRESF SKGEISYSKV RAITRVAEPE TEARWVEQAA QCTAQKLERL VSLHAKINHD QKDENGGRDE DGPNNTRCSW RWNEDGTFSL SVRLDPARGA IIESALVMAM SSLHDSRDSN REDSSTTSDA EGSINDTSIT HAGPEMKADA LTAMSESFLS TGAPTLMSST SHTINVHIDI DTLIGSSREN HGSPLQRHEG NGLNTRRCDV KDHIPVLPNV VRRLSCDSLL RTLIIDSKGN PLMLGRTRRN PTTRLRLAIY ARDRGVCQYP GCHHTRWLQV HHMKEWASGG GNTDLDNLVL ICSLHHRTIH ERRIVLQRGR DGSIVARHRD GTLMQQAPRL HLGPDLLELL SDNTSAAPAE TVPTRRVA
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