Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0058 |
Symbol | |
ID | 3905393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 73539 |
End bp | 74738 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637877388 |
Product | pyruvate dehydrogenase |
Protein accession | YP_479181 |
Protein GI | 86738781 |
COG category | [C] Energy production and conversion |
COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTGC TCACCCCGAC CGGCCACCGG ATCACCACCG CGTCCACGAC GACGGCAGCC GGACCCGACG CGCCGGGACC CGATCCCTCC AGAGCCCGCG CCGGCGGGGT GGACGCCGCG GGAGCGGACC CGCCCCGGAC AGCCGTCGAT CTGGCCGCCC AGATCGCCGA CCTGACCGAC GACGACCTGT ACGGGCTGTA TCGGGACATG GTGTTCATCC GCCGGTTCGA TGAGGAGGCG ACCAGCCTGC AGCGCCAGGG CGAGCTGGGG CTGTGGGCGA GCCTGCGGGG CCAGGAGGCG GCCCAAGTCG GATCCGGCCG GGCGCTGAGG CCCGGCGACA TGGTGTTCCC GTCGTACCGG GAACACGGGG TGGCCTGGTG CCGGGGAGTC AGGCCGAGGG AAATCCTGGC GATCTATCGC GGCACGACGC TCGGTGGCTG GGATCCGGGC ACCCACGGGT GCGCCCTCTA CTCGATCGTC GTGGGCTCGC AGGCACTGCA TGCCACCGGC TACGCGATGG GAATCGCCCG GGACGGCACC AACGACGCGG CCATTGCGTA CTTCGGTGAC GGGGCGTCAA GCGAGGGCGA TGTCAGCGAG GCGTTCGGAT GGGCGAGCGT GTTCGCCGCC CCGCTGGTGT TCTTCTGCCA GAACAACCAG TGGGCCATCT CGGCACCTGC CCGGCGCCAG AGCCGGATCG AGATCGTCCA CCGGGCCGCG GGCTTCGGTT TCCCGGGCGT GCGGGTGGAC GGCAACGACG TGCTGGCGTG TCTCGCGGTG ACCCGGTGGG CCCTGGCGAC CGCGCGTGCC GGGCGTGGTC CGGTGCTGGT GGAGGCCGTG ACCTACCGGA TGAATCCACA CACCACGGCA GACGATCCCA GCCGCTACCG TCCGAAGGGT GAACTGGACA TGTGGCGTCG GCGTGATCCG TTGGACCGGA TGCGCGCCTA CCTGACGGCG CGGGGCCTGC TCACCGAGGA GAGTCTGCGG CAGCTGGCCA TCGAGGCGGA CTCCTTCGCG CACGAGCTGC GCGCGCAGTG CGTCGCGCTG CCGGATCCGA TCCCGGCCAG CCTGTTCGAC CATGTGCAGG TGGCTGAGAA TGAACTCGTG ACGGCCCAGC GATCGGCGTT GGCGGCCATG TTCGACGTGG AGGGGCCCGG CGTGGAGGAC GAGATGGGCG TACCCGAGGG GAACCGGTGA
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Protein sequence | MQLLTPTGHR ITTASTTTAA GPDAPGPDPS RARAGGVDAA GADPPRTAVD LAAQIADLTD DDLYGLYRDM VFIRRFDEEA TSLQRQGELG LWASLRGQEA AQVGSGRALR PGDMVFPSYR EHGVAWCRGV RPREILAIYR GTTLGGWDPG THGCALYSIV VGSQALHATG YAMGIARDGT NDAAIAYFGD GASSEGDVSE AFGWASVFAA PLVFFCQNNQ WAISAPARRQ SRIEIVHRAA GFGFPGVRVD GNDVLACLAV TRWALATARA GRGPVLVEAV TYRMNPHTTA DDPSRYRPKG ELDMWRRRDP LDRMRAYLTA RGLLTEESLR QLAIEADSFA HELRAQCVAL PDPIPASLFD HVQVAENELV TAQRSALAAM FDVEGPGVED EMGVPEGNR
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