Gene Francci3_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0050 
Symbol 
ID3903529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp63095 
End bp63721 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content72% 
IMG OID637877380 
Productnitroreductase 
Protein accessionYP_479173 
Protein GI86738773 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTC TCGCCTGCCT GATGACGCGC CGCACAGCGA CCCGGCTCGT CGAACCCGGT 
CCGACGGTGG AGCAGATTAT GATCATGCTT GGCGCCGCCA CCACGGCGCC GGATCACAAG
ATGCTGCGGC CCTGGCGCTT CGTGGTTGTG CGGAGCGATG CCCGCGCCAC CCTGGCTGCG
GCGATCAAGC GGGCCGCCGA GGCCCTCGGC GGGTTGCCCG AGCCGGTCAT CCGCAAGACC
GCGGGCAAGG CCACCCGTTC CCCGGCGCTC ATCGCCGTCG TCGCATCCCG TGTCGGTTCG
AAGGTTCCGG TCGCCGAGCA GGACGCCTCG GCCGCGGCAG CGGCGCAGAA CATCTGCCTG
GCCGCGCACG CGCTCGGCGT CGCCTCGGCC TGGAAGTCGG TGCCGATGCA GGACAGCGCC
GAGGTCCGGG GGGCGTTCGG GCTGACGTCG GACGAGGTGC TGGTCGGCTG GGTGGAGCTC
GGGACCCAGG CGGACACCGC GCCGCTGCCG GCGCGGCCCG CCGTTCGGCT GGCCCAGGTC
GCGACGGAGA TGGAGGTCGA CGGGACGCTG GTTCCCGTGG CGGCGGACGA TCGGATCTCC
CAGTTCGGGC AAGTGACCAC GGTGTGA
 
Protein sequence
MDALACLMTR RTATRLVEPG PTVEQIMIML GAATTAPDHK MLRPWRFVVV RSDARATLAA 
AIKRAAEALG GLPEPVIRKT AGKATRSPAL IAVVASRVGS KVPVAEQDAS AAAAAQNICL
AAHALGVASA WKSVPMQDSA EVRGAFGLTS DEVLVGWVEL GTQADTAPLP ARPAVRLAQV
ATEMEVDGTL VPVAADDRIS QFGQVTTV