| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0043 |
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| Symbol | |
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| ID | 3903522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 51706 |
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| End bp | 53304 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877373 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_479166 |
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| Protein GI | 86738766 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.162495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATTACG AGCCTGACCG ACGATCGGTG TTACGGACCG CCGCAGCCGG AGCCGGCGGG
CTCGGGCTCG CCGCGCTCGG GCTCGGTGGC GGCCTGATGA GCGCCTGTCA GCAGGAGGAC
GCCCCCCACC CAATACCGAC GGAGATCGAC TGGCGCACGC TCGACGAACG ACTGACCGGT
CCGCTGCTGC GACCGACCGA TCCGGACTAC GCCGTCGCCA GCATGCTGTT CGACCCGGCT
TTCGACGCGG TACGTCCGCA GGCGGTGGTC CGTGCCATGT CCGCGGGGGA CGTCACGGCC
TGCATCGACT TCGCCCGCTC CACCGGGATA CATCTCGTCG CGCGGGCCGG TGGCCACAGC
TACGGGGGTT ACTCAACGAC GACCGGGCTG GTCGTGGACG TGACTGCGAT GGCGTCGGTC
CGGCCGGGGC CCGACGGCAC CGCGCTGATC GGGGCCGGAG CGCTGCTGAT CGACGTCTAC
TCCGCACTCG CCGAGAACGG GCTGGCGCTG CCAGCCGGAT CATGCCCGAC CGTCGGCATC
GCCGGGCTCG CCCTCGGCGG CGGCATCGGA GTGTTGAGCC GGCGCTACGG TCTGACCTGC
GATCGGATGG TCTCCGCCGA GGTCGTGCTG GCCTCCGGGG AGACCGTGCG CACCGACGCC
GACACCGAGC CGGACCTCTT CTGGTCGCTA CGCGGTGCGG GCGGGGGCAA CGTCGGCATC
GTGACGTCGT TCACCTTCGC CACCCATCGG GCGACACCGT TGGCGCTGTT CACCTACCGC
TGGCCCTGGG ACGTGGCGGC GGACGTGCTC ACCGCGTGGC AGGGCTGGAT CGCCGACAGC
GGCGGCGCGC CGGAGGACCT GTGGTCGACC TGCGTCGTGA CCTCGATGCC GACGACCGGG
GCCACCGGCA GCCCAGCCCT GCGGGTGAGC GGCGTGCTCG CGGGCGGCGC CGACGACACG
CGGATCACGT GGCTGCGGGA TCGACTCGCC GACCTCGTCG CCGCCGTCGG CCGGAGGCCC
TCGAGCACCT TCGTCGCCCA GCGTGGCCAT CTCGAGACGA TGTTGCTTGA GGCGGGCTGC
GCGGGCAAAA GCGTCGACGC GTGCCACCTG CGCGACCGGA CGCCCGGAGG CACCCTGCCA
CGGGTGGCCC AACGGGCTGC CTCGGCATTC CTCACCGAAC CGATGCCTGC CGGCGGGATC
GAGACGATGC TCGCCGCGCT CGAGCGACGC CAGCGCACAC CCGGGGCCGG TCCGGGTGGC
GTGATCCTGG ATTCCTGGGG CGGCGCGATC AACCGGGTCG GCCCGGGTGA CACGGCGTTC
GTGCACCGCA ACACGCTCGC CAGCGCCCAG TTCGTCGCCG GCTACTCCGT CGACGCATCC
CCTGCGGACA AGGAGGCTAA CCAGAGCTGG TTGCGATCCA CGGTGGCGGC GACGGCGCCG
TTCATGTCGT CGTCGGCGTA CCAGAACTAC ATCGACCCGG ACCTCACCAC CTGGGCCGAT
GCGTACTACG GGGCGAACCT TCCGCGGTTG CGCCAAGTCA AGCGCGCCTA CGACCCGGAC
AACCTGTTTC GCTTCGCGCA GAGCATCGCG CCGTCCTGA
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| Protein sequence | MDYEPDRRSV LRTAAAGAGG LGLAALGLGG GLMSACQQED APHPIPTEID WRTLDERLTG
PLLRPTDPDY AVASMLFDPA FDAVRPQAVV RAMSAGDVTA CIDFARSTGI HLVARAGGHS
YGGYSTTTGL VVDVTAMASV RPGPDGTALI GAGALLIDVY SALAENGLAL PAGSCPTVGI
AGLALGGGIG VLSRRYGLTC DRMVSAEVVL ASGETVRTDA DTEPDLFWSL RGAGGGNVGI
VTSFTFATHR ATPLALFTYR WPWDVAADVL TAWQGWIADS GGAPEDLWST CVVTSMPTTG
ATGSPALRVS GVLAGGADDT RITWLRDRLA DLVAAVGRRP SSTFVAQRGH LETMLLEAGC
AGKSVDACHL RDRTPGGTLP RVAQRAASAF LTEPMPAGGI ETMLAALERR QRTPGAGPGG
VILDSWGGAI NRVGPGDTAF VHRNTLASAQ FVAGYSVDAS PADKEANQSW LRSTVAATAP
FMSSSAYQNY IDPDLTTWAD AYYGANLPRL RQVKRAYDPD NLFRFAQSIA PS
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