| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0034 |
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| Symbol | |
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| ID | 3903609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 39979 |
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| End bp | 42114 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637877364 |
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| Product | Type IV secretory pathway VirB4 components-like |
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| Protein accession | YP_479157 |
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| Protein GI | 86738757 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.694512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTCAG CACACGACGA CGCCTCGGCG CGCGGGTACC CGGTCCCGAC CGGCTACCCG
ACCGGCGGCT ATCCGGGTAA CAACTATCCG GGTAACAGCA ACACGAGCCA TGGCCAGCCA
GGCAATGGCC AGCTGAGTAA CGGCTATGCG GGCAACGGCT ATGCGGGCAA CGGCCATGCG
GTGGGCGGTT ACGTGCCGGC CGGCTATCCA GCCGGTGAAG CCGTGGCCGG TCACCCCGAG
CGCGCCGACA GCAGCCCCGG CGGCCCCGAC GACGAGGGCC CCGACGGCGA CTTCGGCGAC
GGCGACTTCG ACGACAGCGA CTTCGACGAC AGCGACTTCG ACGACCCGCC CAGCTACGAC
GAGACCGGTT ACGACCCCGA CGGCTACGAG GCGGCGGACT ACGAGGCCAC CTCCCACGAC
CCGGGACGCG ATGCCGAGGG CTATGTGGAC CTCGGCGGCG GTCCGCGGCG GCGGCGCGAG
GGACGCCTAT CCGCGGAGCC CCCCCGGCGC AGCCGGCGCG CGGAACGGGC CGCGGCGGCC
ACCGAGAAGG CTGCGATGCG CCGGGCCCAG ATAGCCCTGC GCCGGGGCGC ACAGCCGCCA
CGGCTGTTCG GGCCGTTCGG CGGGCGAACG TTCCACAAGC TGCGGCTTCC CGCGCACATG
GAGACGACGG CGCAGATCGC CGGCATCTAC CCGTTCGTCG TCGACTCCGG CCTGGCCGCG
CCCGGCATGT ACATCGGTCG GCACGTCTGG TCCGGGAACT CGTTCGACTT CGACGTCTTC
GAGCTGTACC GCCAGCAGGT CATCGAGAAT CCGAACTTCG CCGTGTTCGG CGCGGTCGGC
TCCCGCAAGT CGGCGCTGCT GAAGACGCTG ATCTCGCGAG GGGCGGCGTT CGGCTACCAG
GCCGCCGTAC CCTGTGACCC GAAGGGCGAG TACACGCGGC TGGCTCGGCG CCTCGGCTGT
GAGCCCACCT ACATCGGGCC CGGCATGGCC ACCCGGCTGA ACCCGCTCGA CGCCCCACCC
CGTCCGATGG GCATCGCCGA CGAGGACTGG GCCCGTGAGG TGAAGCGGGC TCGTTCGGCG
CTGCTGTCGT CCCTGATCGA GACGGCGAAG GGGGTGCCGC TCACCCCGGC CGAGCACACC
GCGGTCGACC TGGCTCTCGA CGTCGTGACC CGGCAGATCA CCGGGGCGTC CCCGGACCGG
TGGGCAACCC CGATCCTGCC GCACGTGCTG GAGGCGATGA CGGATCCAAC CGAGGAGGAC
TGTGTCAACC TCCCGATGAC CGCGACCGAG CTGCGCGACG CCTCCCGGGA TGCCACGCTG
ACCCTGCGCC GGCTCACACA CGGCGCGCTG GGCGGTCTGT TCGACGGGCC GACCACCTCT
CCCCTGGACT TCGACCGTCC GATCGCCGTG CTGAACCTGG AGCGGGTCCA GGGCAGCGAT
GAGATGATCG CCCTGATCAT GACCTGCGCG CAGGCGTGGA TGGAAGCGGC ACTCATGCGC
CAGGACGGCG TGCAGCGCTA CGTCGTCTAC GACGAGTGCT GGCGGCTGAT GCGGTTCGCC
GGCCTCGTCC GCCGGCTGTC CGCCCAGCAG AAGCTCGCCC GACAGTGGGG ATGCGCGAAC
GCGATCGTCG CCCACCGCAT CTCCGACCTG CTGTCCGCCT CGCCGGACTC GGTGGAGATC
GCCAAAGGCC TGCTCGCCGA AACCGCGATC CGGATCCTCT ACAAGCAGGC GTCCGATCAG
ATCGCCGACA CGCAGGCCGC GCTCGGGCTC ACCGACGTCG CCGCCGACCT GCTCCCCAGG
CTCGACCCGG GCTACGCCCT GTGGCTGATC GGCGCCCGCG CCTTCTACGT CGAGCACGTC
GTCGGCGACC TGGAGATCCC CGTGGTGCTC AACGGCTCGA AGATGCACGG CGAGGTCGAC
GACACTAACC TGACCCCCGA CGATCTGGAT CCGGCCGAGC TGGACCCGCC GGATCTCGGT
CCCGGCCGGC TGCGCCGGAT GGCCGACGAA CTCCTCGGCG ACCGGGAGCT CGCCGGCCGG
GAGCTCGCCG GCGGCCCGGC CGTCCCACGG GCCGCCGACC TCACGGGCGG GTTCGGTTAC
CCGCCTGTGG AGCCCAGTCC CAGCTCCACC GGCTGA
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| Protein sequence | MSSAHDDASA RGYPVPTGYP TGGYPGNNYP GNSNTSHGQP GNGQLSNGYA GNGYAGNGHA
VGGYVPAGYP AGEAVAGHPE RADSSPGGPD DEGPDGDFGD GDFDDSDFDD SDFDDPPSYD
ETGYDPDGYE AADYEATSHD PGRDAEGYVD LGGGPRRRRE GRLSAEPPRR SRRAERAAAA
TEKAAMRRAQ IALRRGAQPP RLFGPFGGRT FHKLRLPAHM ETTAQIAGIY PFVVDSGLAA
PGMYIGRHVW SGNSFDFDVF ELYRQQVIEN PNFAVFGAVG SRKSALLKTL ISRGAAFGYQ
AAVPCDPKGE YTRLARRLGC EPTYIGPGMA TRLNPLDAPP RPMGIADEDW AREVKRARSA
LLSSLIETAK GVPLTPAEHT AVDLALDVVT RQITGASPDR WATPILPHVL EAMTDPTEED
CVNLPMTATE LRDASRDATL TLRRLTHGAL GGLFDGPTTS PLDFDRPIAV LNLERVQGSD
EMIALIMTCA QAWMEAALMR QDGVQRYVVY DECWRLMRFA GLVRRLSAQQ KLARQWGCAN
AIVAHRISDL LSASPDSVEI AKGLLAETAI RILYKQASDQ IADTQAALGL TDVAADLLPR
LDPGYALWLI GARAFYVEHV VGDLEIPVVL NGSKMHGEVD DTNLTPDDLD PAELDPPDLG
PGRLRRMADE LLGDRELAGR ELAGGPAVPR AADLTGGFGY PPVEPSPSST G
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