Gene Francci3_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0008 
Symbol 
ID3902954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp10825 
End bp11724 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content77% 
IMG OID637877337 
Producthypothetical protein 
Protein accessionYP_479131 
Protein GI86738731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCGAC CGGGTCCGGG TGGCGCCAGG CCGAGGGACT TCGCCGGCGA CGATACGGCG 
GCCGGGCCGA GTTTCCGGGT AGCCGAGCCC GCCTCGTCGG AGTGGGTTCC AGCGGCCCCG
GTACGAGCCG ACCCGGATGG GGACACCGAC GACGTTCCGC TGGCACGTCC CGTGGAGGTG
CCAGCCGAGG ACCCTGCGCC CGACACACCC GACGCGCCCG CGGAAGAGGT GGACAAGGAC
CGCGAGGACA AGGGGGACTT CGCCCCGTCG GGGACCGATC CGGAGCGGGA CGCCGCCGAA
CCCGCCGCAC CCGAACCCGA ACCCGCCGAA CCCGACGCCG ACGAGCCGGG TTCAGCCGAA
TGGGCTTTTG ACGACCCGGC CTTCGACGAC CCAGTCGAAC CCGTCGGCCC CCCGGCGGAG
GACTGCGGCG GGTCCGCCGC GCCTCCGGCC GGGCCGCGGC CGCCCTCCCG CTCATCCACG
GGCCGACCGG ACCGCCCGGG CCGCTGGAAG AACGGATTAC CGGACTCGGG CCCATCGCCG
GCCGCGGGCA CCTTCACCGT CTCGCTGCCG GCGTCCTCCC CACGGCCGTC CCGCAGCGAC
AACGAGCGGC CCGCGGCGTC CGCCGCGCGT CCCGACGCCG GGCCGGCGCC GGCCCGGCGG
CCGGCTTCCG AATCACGCCC GGCGGAATCG GAAACACCAG CGGAACCCGC GGAATCCGGG
CCCGCGGAAT CCGGGCCGGA GGAGCTCGCG CCTCTGGCCG CGCCGCCAGC ACCGGAGGAA
CCAACGGAAG CGGGTCTCAC CGTGGACCGT GGGCCGGCCC CGTCCCCCCC GCTCGGCCGG
CGGGACTGCT CGGTGGCACG CGATCCCTCC GCCCCGGCGG CCGAGGAGGG GCCGCGGTAG
 
Protein sequence
MARPGPGGAR PRDFAGDDTA AGPSFRVAEP ASSEWVPAAP VRADPDGDTD DVPLARPVEV 
PAEDPAPDTP DAPAEEVDKD REDKGDFAPS GTDPERDAAE PAAPEPEPAE PDADEPGSAE
WAFDDPAFDD PVEPVGPPAE DCGGSAAPPA GPRPPSRSST GRPDRPGRWK NGLPDSGPSP
AAGTFTVSLP ASSPRPSRSD NERPAASAAR PDAGPAPARR PASESRPAES ETPAEPAESG
PAESGPEELA PLAAPPAPEE PTEAGLTVDR GPAPSPPLGR RDCSVARDPS APAAEEGPR