Gene Adeh_4216 details

Gene Information

• Locus tag: Adeh_4216
• ID: 3888191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: -
• Start bp: 4843748
• End bp: 4845607
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 637865774
• Product: superfamily I DNA/RNA helicase
• Protein accession: YP_467417
• Protein GI: 86160632
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1112] Superfamily I DNA and RNA helicases and helicase subunits
• TIGRFAM ID: [TIGR00376] DNA helicase, putative

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.120406
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGACCTCG CGCACCACCT CGACCGCCTC GCCGCGCTGC TCGCCGCCGA GCGCGACGAG 
GAGCGGGCCC GCTTCGCCGA GGCGAAGGGG CGCCTCTCGC TCGCCGAGCG CGAGGCGCGC 
GGGCTGGCCA TCGCGGACGT GGAGGCGCAG GACGAGGGCG CGCTGGCCGG GCGGGCGCTG 
GTGACGTTCG GGCGCGGCGG GCGCCCGCTG CCGGGCGGGC GGATCGGCGC GGGGAGCCTG 
GTGTCGGTGG CGCAGCGCCG CGACACGCCG CCGGACGCGC CGCAGGGCGT GGTGGCGCGG 
CGCACGCGCA CCACGGTGGC GGTGGCGTTC GACGAGCCGC CGCCGGACTG GGTCACCGAC 
GGCCGGGTGG TGCTCGAGCT CGAGCCGTCG CCAGTCACGT GGGAGCGGCT CTCCGGCGGC 
CTGCGCCGCC TCCGCGACGA TCGCGCCGGG AAGCGCTGGC ACGCGGTGCT CGCGGGCGAG 
CCGGCCCGCT TCCTCCGCGC GCCCCGCGGC CCCGCGCTGG ACGCGCCGCT CAACCCGGAG 
CAGCAGGCCG CGCTCGAGCT CGCCGACCGC GCCGAGGACC TCGCGCTCGT GCACGGGCCG 
CCCGGCACCG GCAAGACCAC CGTGCTCGTG GAGGTGATCC GCCGCGCCGC CGCCCGCGGG 
GAAACCGTGC TCGCGGCCGC GCCCTCCAAC CTGGCGGTGG ACAACCTGGT GGAGCGGCTC 
GCCGCGGCGG GCCTCGCCTG CGTGCGGGTG GGCCACCCGG CGCGCGTGCT CCCGGGCCTG 
CTCGAGCACA CGCTCGAGGC GCGGGTGGAG GCGCACGAGG CGGCGCGGAT CGCGCAGGAC 
CTCGTGGACC AGGCGCTCGC GCTGCGGCGC GACGCGCGCA AGCGGCGGAA GAAGCGCGGC 
CCGGGCCGGT TCAGCGCGTC GCGGGAGCAG GAGCGGGAGG CGCGGGCGCT GCTCGCCGAG 
GCGCGCCGGC TCGAGGCGCG GGCCGAGGCG GAGGTGCTGG AGCGGGCGCA GGTGGTGCTC 
GCCACGCTCA CCTCGCTCGA CGCGCCGGCG CTCGCCGGCC GCCGCTTCGC GCTCGCGGTG 
GTGGACGAGG CCACCCAGGC GGTCGAGCCG GCCGCGTACC TGGCGCTGCT GCGCGCCGAC 
CGCGCCGTGC TGGCCGGCGA CCACCTGCAG CTGCCGCCCA CGGTGCTCTC CGCCGCGGCG 
CAGGCGGGCG GGCTGGGGGT GTCGCTGTTC GAGCGGCTGG TGGAGGCGCA CGGCGACCGG 
GCGCGGGTGA TGCTCGCCGA GCAGCACCGC ATGAACGCGC GGATCATGGC GTTCCCCTCC 
GAGGCGCTCT ACGGCGGCGC GCTCCGCGCC CACCCGGCCG CGGCCGGCCG CGCCATCGAC 
GACGCGCCGC TCGAGCTGGT GGACACCTCC GGGCGCGGCT TCGAGGAGGA GACGCCGGAG 
GGCTCCGACT CGAAGCAGAA CGCCGGCGAG GCGGAGCTGG CGGCGTCGGA GGTCCGGCGC 
CTGCTCGCGG CCGGGCTCGC CCCCGCGGAC GTGGCGGTGA TCTCGCCGTA CGACGCGCAG 
GTGCAGCGGC TCCGGCAGCT CCTCGCCGAC GAGCTGGAGG CGGGCCTCGA GGTGGACACG 
GTGGACGGCT TCCAGGGGCG CGAGAAGGAG GCGGTGGTGG TGTCGCTGGT GCGCTCCAAC 
GAGGCGGGCG AGGTGGGCTT CCTCGCCGAC GTGCGCCGCA TGAACGTGGC GCTCACCCGC 
GCGCGCGCGA AGCTGGTGGT GGTGGGCGAC GGCAGCACCG TGTCGCGCCA CCCGTTCTAC 
CGGAGCTTCC TCGAGCACGC CGAGCGCGCC GGCGCGTGGC GGAGCGCGTG GGAGCGGTGA 

 

Protein sequence

MDLAHHLDRL AALLAAERDE ERARFAEAKG RLSLAEREAR GLAIADVEAQ DEGALAGRAL 
VTFGRGGRPL PGGRIGAGSL VSVAQRRDTP PDAPQGVVAR RTRTTVAVAF DEPPPDWVTD 
GRVVLELEPS PVTWERLSGG LRRLRDDRAG KRWHAVLAGE PARFLRAPRG PALDAPLNPE 
QQAALELADR AEDLALVHGP PGTGKTTVLV EVIRRAAARG ETVLAAAPSN LAVDNLVERL 
AAAGLACVRV GHPARVLPGL LEHTLEARVE AHEAARIAQD LVDQALALRR DARKRRKKRG 
PGRFSASREQ EREARALLAE ARRLEARAEA EVLERAQVVL ATLTSLDAPA LAGRRFALAV 
VDEATQAVEP AAYLALLRAD RAVLAGDHLQ LPPTVLSAAA QAGGLGVSLF ERLVEAHGDR 
ARVMLAEQHR MNARIMAFPS EALYGGALRA HPAAAGRAID DAPLELVDTS GRGFEEETPE 
GSDSKQNAGE AELAASEVRR LLAAGLAPAD VAVISPYDAQ VQRLRQLLAD ELEAGLEVDT 
VDGFQGREKE AVVVSLVRSN EAGEVGFLAD VRRMNVALTR ARAKLVVVGD GSTVSRHPFY 
RSFLEHAERA GAWRSAWER