| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_4115 |
|---|
| Symbol | |
|---|
| ID | 3887041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 4729308 |
|---|
| End bp | 4730432 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 83% |
|---|
| IMG OID | 637865673 |
|---|
| Product | Sel1 family protein |
|---|
| Protein accession | YP_467316 |
|---|
| Protein GI | 86160531 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGCGC TCGCCGCCGC CCTGCTCGCC GCCGCCGCCG CCGCCGCCGC CCCGCCCATG
GCCTGCGAGC GGCACGCCAG CCTGTTCCCG AACGCGCCGC GTCCGCCGGG CGGGGAGCCG
GGCTGCGCCG CGGCGCTGCG CGAGGCGTGC GACGCGGGGC GGCGGCTCGC CTGCGCCGAG
CTGGGGCGCG TGCTCGAGGC GGGCACCGCC GGGCCGGCGG ATCCGGCCGG CGCCGCCGCG
CTGCACCGCC GCGCCTGCGA CGCCGGCGTG GGCGCCGCGT GCGCCCGCCT CGCGCACCAC
CTCCGCGAGG CGGGGCAGCC GGCGCGCGCG GTGACCGAGG CGCTCGAGGA GGGCTGCGCG
CTCGGCTCGG GCGCCGCCTG CCTGGAGCGC GCCGCGGCGG AGCGGGACCC GGCGCGCGGG
GCGCGGCTCC GCGAGCGCGC CTGCGACCTC GGCGAGGCCG AGGGCTGCCT GGCGATCGCG
ACCGGCGCGC CGCCGGCGCG CGCGCAGGCG CTGCGGGATC GCGCCTGCTG GCTGGGCTCG
GCCGACGGCT GCGCGGCCGC CGGCGCGGGG CTCGCGCGCG GCGACGCGGG GCGGGAGGAT
CCGGTCGCGG CGCGGCTGCG GCTCGAGCGC GGCTGCGAGC TGGGCGGCGC GGAGGCGTGC
GCGCGGCTCG GCCTGGTGCT GCTCGCGGAG GGGCGGCGCG GCGAGGCGGC GCGCGGCGCG
CGGCTGCTGG TCGAGGGGTG CCCGGCGCTC GGCGCCGAGG AGTGCCTGGA CTCCGCCGAG
GCCTGGCTGA AGGGCCCGCA GGCGGTCATC GACGAGGGCT CGGATCCGGC GCTGCTCGAC
CTCGCCTGCC GGCGGAAGGT CGCGGACGCC TGCGCGTGGC TGGGGCGGAT GGTGCAGGAG
GGCCGGCGGG TGCCGGCCGA CGGCCCGCGC GCCGCCGAGC TGTACCGGCG CGCCTGCGAG
GCGGGCCGCG CGAGCGCCTG CTCCGACCTG GGCGTGCTCT ACCGGTTCGG CGCCGGCGTC
CCGCGGGACG AGGCGCGCGC CGGGGCGCTG TTCGCCGGCG CCTGCGAGAG GGGCGTCGAG
CGCGCCTGCG CGCTGCGCGA GGATCCCTCC CGGCCGATCG ACTGA
|
|---|
| Protein sequence | MLALAAALLA AAAAAAAPPM ACERHASLFP NAPRPPGGEP GCAAALREAC DAGRRLACAE
LGRVLEAGTA GPADPAGAAA LHRRACDAGV GAACARLAHH LREAGQPARA VTEALEEGCA
LGSGAACLER AAAERDPARG ARLRERACDL GEAEGCLAIA TGAPPARAQA LRDRACWLGS
ADGCAAAGAG LARGDAGRED PVAARLRLER GCELGGAEAC ARLGLVLLAE GRRGEAARGA
RLLVEGCPAL GAEECLDSAE AWLKGPQAVI DEGSDPALLD LACRRKVADA CAWLGRMVQE
GRRVPADGPR AAELYRRACE AGRASACSDL GVLYRFGAGV PRDEARAGAL FAGACERGVE
RACALREDPS RPID
|
|---|
| |