Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3960 |
Symbol | |
ID | 3887772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 4573598 |
End bp | 4574182 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 82% |
IMG OID | 637865518 |
Product | 2',5' RNA ligase |
Protein accession | YP_467161 |
Protein GI | 86160376 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.250579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCACCC GCCGCCTGTT CGTGGCCCTC GAGCCCACCG ACGCCGTGCG CCGCCGCATC GGCGCCGCGG CCGACGCGCT GCGCGCCGAC GCCGGGCGCG CGGCGGGCGA CGTCCGCTGG GTGGCGCCCG ACGGCGTGCA CCTCACGCTG CAGTTCCTGG GCGCGGTGCC GGAGGAGCGG GTGGAGGCGG TGCGCGCCGC GGTGGAGGCG GCGGCCGCCG TCGCCCGGCC CATGGCGCTC GAGGTGAGCG GCGCGGGCGG CTTCCCCAAC GCGCGCCGCC CGCGGGTGGT CTGGCTCGGG CTCGGCGGCG ACGTGGCGGC GCTCTCGGCG CTGGTGGCCG ACCTCGGCGC GCGGCTCGCG CCGCTCGGGT TCGCGCCCGA GTCGCGCCCG TTCTCGCCGC ACCTCACGCT GGGCCGCGCG CGCGATCCGC GCGGCGCCCC CGGCCTCGGC GGCGCGCTGG CGGCGCAGGC CCGGGCCGAC GGCTTCGGCT GGCGCGCGAC CGAGCTGGTG CTGTTCGAGT CGCACCTCTC GCCGAAGGGC GCGCGCTACG AGGCGCTCCT GCGCGCGCCG CTCGGCGGCG GGTAG
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Protein sequence | MVTRRLFVAL EPTDAVRRRI GAAADALRAD AGRAAGDVRW VAPDGVHLTL QFLGAVPEER VEAVRAAVEA AAAVARPMAL EVSGAGGFPN ARRPRVVWLG LGGDVAALSA LVADLGARLA PLGFAPESRP FSPHLTLGRA RDPRGAPGLG GALAAQARAD GFGWRATELV LFESHLSPKG ARYEALLRAP LGGG
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