Gene Adeh_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_3960 
Symbol 
ID3887772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp4573598 
End bp4574182 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content82% 
IMG OID637865518 
Product2',5' RNA ligase 
Protein accessionYP_467161 
Protein GI86160376 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.250579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCACCC GCCGCCTGTT CGTGGCCCTC GAGCCCACCG ACGCCGTGCG CCGCCGCATC 
GGCGCCGCGG CCGACGCGCT GCGCGCCGAC GCCGGGCGCG CGGCGGGCGA CGTCCGCTGG
GTGGCGCCCG ACGGCGTGCA CCTCACGCTG CAGTTCCTGG GCGCGGTGCC GGAGGAGCGG
GTGGAGGCGG TGCGCGCCGC GGTGGAGGCG GCGGCCGCCG TCGCCCGGCC CATGGCGCTC
GAGGTGAGCG GCGCGGGCGG CTTCCCCAAC GCGCGCCGCC CGCGGGTGGT CTGGCTCGGG
CTCGGCGGCG ACGTGGCGGC GCTCTCGGCG CTGGTGGCCG ACCTCGGCGC GCGGCTCGCG
CCGCTCGGGT TCGCGCCCGA GTCGCGCCCG TTCTCGCCGC ACCTCACGCT GGGCCGCGCG
CGCGATCCGC GCGGCGCCCC CGGCCTCGGC GGCGCGCTGG CGGCGCAGGC CCGGGCCGAC
GGCTTCGGCT GGCGCGCGAC CGAGCTGGTG CTGTTCGAGT CGCACCTCTC GCCGAAGGGC
GCGCGCTACG AGGCGCTCCT GCGCGCGCCG CTCGGCGGCG GGTAG
 
Protein sequence
MVTRRLFVAL EPTDAVRRRI GAAADALRAD AGRAAGDVRW VAPDGVHLTL QFLGAVPEER 
VEAVRAAVEA AAAVARPMAL EVSGAGGFPN ARRPRVVWLG LGGDVAALSA LVADLGARLA
PLGFAPESRP FSPHLTLGRA RDPRGAPGLG GALAAQARAD GFGWRATELV LFESHLSPKG
ARYEALLRAP LGGG