| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3947 |
|---|
| Symbol | |
|---|
| ID | 3887759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 4559088 |
|---|
| End bp | 4560815 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637865505 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_467148 |
|---|
| Protein GI | 86160363 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCG TCCGCTACAC CCAGGCCTTC ATCCCCACGC TCAAGGAAGC GCCCGCCGAC
GCGCAGGTCG CGAGCCACAA GCTGCTCGTC CGCGCCGGCT TCATCCGCCA GCTCGGCGCC
GGCATCTACG ACTACCTGCC GCTCGCGAAG CGCTCGCTCA CCAAGATCGA GGCGATCGTC
CGCGAGGAGA TGAACGCCAT CGGCGGCCAG GAGTTCTTCC TGCCCGCGCT CCACCCCGCG
GAGATCTGGA AGGAGTCCGG CCGCTGGGAG GTGATGGGCG ACAACATGTT CCGGCTGAAG
GACCGCAAGG GCGGCGACTA CGGCCTCGGC ATGACGCACG AGGAGATCTT CACCGCCATC
GCCCGCGACG AGCTGCGCAG CTACCGGCAG CTCCCGCAGG TCTGGTACCA GATCCAGACG
AAGTTCCGCG ACGAGCCGCG GCCCAAGTCC GGCCTGCTGC GCGTGCGCCA GTTCACCATG
AAGGACGCGT ACTCCTTCGA CGTGGACCGG GCCGGGCTCG ACAAGAGCTA CGAGGACCAG
CGCCAGGCCT ACGAGAAGAT CTTCACCCGC TGCGGCCTCG ACTTCGTGGC GGTGCAGGCG
CACTCCGGCT CGATGGGCGG CAGCGAGTCG TCCGAGTTCA TGGTGCGCAC CGACGCCGGC
GAGGACCTGG TGGCCGCGTG CCCGAGGTGC CGGTACGCCG CGAACACCGA GACCGCCACC
TCGCGCGTCG CCGCCGAGGC CGACGGCCCG GGGCTCGCCG CGCCCGAGAA GTTCCCCACC
CCCGGCGTCG TGACCATCGA GGCGCTGGAG CAGGCCCCGC ACTCGGTGCC GGCGCGGCGG
CAGCTGAAGA CGCTCGTCTA CATGGCCGAC GAGCGGCCGG TGATCGCGGT GGTGCGCGGC
GACCAGGAGC TGAACGAGGC GAAGCTCCAG ACCGCCACCG GCGCGCAGGT GGTCCGCCCG
GCGCACGCGG AGGAGATCCC GCCGCTCATG GGCGCGCACG CCGGCTCGCT CGGCGCGGTG
CGGTTCACGA GGGCGCGCGT GGTGGTGGAC CCGTCGCTCG CCGACCGCAA GGACATGGTC
ACCGGCGCGA ACGAGGACGG CTTCCACCTC CGCGGCGTGG ACGTCCGGCG CGACCTCCTC
GCGCACGGCG CCACGCTGGC CGAGCTGCGC ACGGTGAAGG CCGGCGAGGG CTGCCCGCGC
TGCGACGGCG CGCTCGAGGT GTTCAAGGCG CTCGAGGTCG GCCACATCTT CAAGCTCGGC
ACCAAGTACT CCGAGTCCAT GAAGGCGACC GTGCTCGACG CCGGGGGCAA GCAGGTGCCC
ATCGTCATGG GCAGCTACGG CATCGGCGTG GAGCGCATCC TCGCGGCCGC CATCGAGCTG
CACCACGACG ACAACGGCAT CGTGTTCCCC ATGGCCATCG CGCCGTTCCA CGCCACCGTG
CTCACGCTCG GGCCGGAGCC CGAGCTGCGC AAGGCGGCCG AGGAGGTGGT GGCCGCGCTC
GGGAAGGAGG GCGTCGAGGT GCTGTTCGAC GACCGCGACG AGCGCGCCGG GGTGAAGTTC
AAGGACGCCG ACCTGCTCGG CATCCCCATC CGCGTCGCGG TGGGGAAGAA GGGGCTCGCC
GCCGGCAACG TGGAGTGGAA GCTGCGCAGG GGCGGCGCGG TGGAGCTCGT CCCGCTGGGC
GAGGTCGCGC GCAAGGCGGC CGAGGCCGTG CGGGCGGCGA CGACCTAG
|
|---|
| Protein sequence | MHAVRYTQAF IPTLKEAPAD AQVASHKLLV RAGFIRQLGA GIYDYLPLAK RSLTKIEAIV
REEMNAIGGQ EFFLPALHPA EIWKESGRWE VMGDNMFRLK DRKGGDYGLG MTHEEIFTAI
ARDELRSYRQ LPQVWYQIQT KFRDEPRPKS GLLRVRQFTM KDAYSFDVDR AGLDKSYEDQ
RQAYEKIFTR CGLDFVAVQA HSGSMGGSES SEFMVRTDAG EDLVAACPRC RYAANTETAT
SRVAAEADGP GLAAPEKFPT PGVVTIEALE QAPHSVPARR QLKTLVYMAD ERPVIAVVRG
DQELNEAKLQ TATGAQVVRP AHAEEIPPLM GAHAGSLGAV RFTRARVVVD PSLADRKDMV
TGANEDGFHL RGVDVRRDLL AHGATLAELR TVKAGEGCPR CDGALEVFKA LEVGHIFKLG
TKYSESMKAT VLDAGGKQVP IVMGSYGIGV ERILAAAIEL HHDDNGIVFP MAIAPFHATV
LTLGPEPELR KAAEEVVAAL GKEGVEVLFD DRDERAGVKF KDADLLGIPI RVAVGKKGLA
AGNVEWKLRR GGAVELVPLG EVARKAAEAV RAATT
|
|---|
| |