Gene Adeh_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_3929 
Symbol 
ID3886379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand+ 
Start bp4534214 
End bp4535176 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content77% 
IMG OID637865487 
Productformamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 
Protein accessionYP_467130 
Protein GI86160345 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.143589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCGGAGC TCCCGGACAT CGAGGTCTAC GTCGAGGCGC TCGCCGCGCG GGTGCTGGGT 
CAGCCGCTGG AGCGCATCCG GCTGGGGAAC CCCTTCCTGC TCCGCTCCGC CGACCCGCCG 
CTCGCCGAGG CGGAGGGGCG GCGCGTCGCC GCGGTGCGGC GGCAGGGGAA GCGCGTGGTG 
CTGGCGCTCG ACGGCGACCT GTTCCTGGCG CTGCACCTCA TGATCGCCGG ACGCCTCCAC 
TGGAAGGACC CCGGCGCGCG GCTCCCGGGG AAGGCGGGGC TGGCGGCGTT CGACTTCCCG 
AACGGCACGC TCGTCCTCAC CGAGGCCGGC ACGAAGCGCC GCGCCGCGCT GCACCTGGTG 
CGCGGCGCCG CGGCGCTCGC CGCGCTCGAC CGCGGCGGCC TCGAGCCGCT CGGGGCGGAC 
CTCGCCGCGT TCGCCGCCGC GCTCCGGCGC GAGAACCACA CGCTCAAGCG CGCGCTCACC 
GATCCCTCGC TCTTCTCCGG CATCGGCAAC GCGTACTCGG ACGAGATCCT GCACCGCGCG 
CGGCTCTCGC CGGTCGCGCT GACCTCGCGG CTCGGCGACG CCGAGGTGGC GCGCCTGCTC 
GAGGCCACGC GCGAGGTGCT CGCCGGCTGG ACGGCGCGGC TGCGCGAGGC GGCGGGGAGC 
GGCTTCCCGG AGGGCGTCAC CGCCTTCCGC GAGGGCATGG CCGTGCACGG GCGCCACCGG 
CAGCCGTGCC CGGTGTGCGG CACCGCGGTG CAGCGGATCG TCCGCGCCGA GAACGAGGTG 
AACTACTGCC CGCGCTGCCA GACCGGCGGG CAGATCCTCT CCGACCGGTC CCTCGCCCGC 
CTGCTGAAGC AGGACTGGCC GCGGACCGTG GACGAGCTGG AGCGCAACCC GGCGCTCGGC 
CTCCGGCCCG CGCCGGAGCC CGCCGCCTCA GCGCCGAAGG CGCCGCGCCG CCGGACGCGC 
TGA
 
Protein sequence
MPELPDIEVY VEALAARVLG QPLERIRLGN PFLLRSADPP LAEAEGRRVA AVRRQGKRVV 
LALDGDLFLA LHLMIAGRLH WKDPGARLPG KAGLAAFDFP NGTLVLTEAG TKRRAALHLV 
RGAAALAALD RGGLEPLGAD LAAFAAALRR ENHTLKRALT DPSLFSGIGN AYSDEILHRA 
RLSPVALTSR LGDAEVARLL EATREVLAGW TARLREAAGS GFPEGVTAFR EGMAVHGRHR 
QPCPVCGTAV QRIVRAENEV NYCPRCQTGG QILSDRSLAR LLKQDWPRTV DELERNPALG 
LRPAPEPAAS APKAPRRRTR