| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3928 |
|---|
| Symbol | |
|---|
| ID | 3886378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 4532366 |
|---|
| End bp | 4533841 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 637865486 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_467129 |
|---|
| Protein GI | 86160344 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0519913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTCG ACGACGACGT CCTCTTCTCC GGCGTGGCGG CGCTCTCGCG CCGCATCCAG
GCGCGCGAGC TCTCCCCGGT GGAGCTGGCC GAGGCGTACC TCGCCCGCAT CGACGCGCTC
GGCCCCGCGC TCGGCTGCTT CGTCACCGTG ACCCGCGAGC GCGCGCTCGC CGACGCTCGG
GCCGCCGAGG CGGACCTCGC CGCCGGGCGC TGGCGCGGGC CGCTCCACGG CGTGCCCTAC
GGCCTGAAGG ACCTGGTGGA CACCGCCGGC ATCCGGACGA CCTTCGGCGC GCGCCCGTAC
GCGGACCGCG TGCCCGAGCA CGACGCGACC GTGGCCCGGC GGCTCGCCGA GGCGGGCGGC
GTGCTGCTCG GGAAGCTCTC GATGATCGAG CTGGCCGGCG GGCTCGGCTA CCACACCGGC
GAGGCGGCGC TGAACGGGCC CTGCCGCACG CCCTGGGACC CGACGCGCTG GGCGGGCGGC
TCGTCGTCGG GCGCCGGCTC GGCCGTGGCC GCGGGGCTCG TGCCGTTCGC GATCGGCTCG
GAGACCTGGG GCTCCATCAC CTGCCCCGCC GCGTTCTGCG GCGTGACCGG CCTCCGCCCC
ACCTACGGCG TGCTCTCCCG CGCCGGCGCC ATGGCGCTCT CGTACACGCT CGACAAGCTC
GGCCCGATGG CGCGGACCGC AGAGGACTGC GCGCTCGTGC TCGGCGTGCT CTCCGGCGCC
GACCCCCGCG ACCCGACCTC GATCGCGCCG CCGCCGGGGC TCGGCAACGG CAAGGTGCGC
GGCGGGATCC CGCGGGGCCT GCGGGTGGCG GTGCTCGGCT TCCCGGAGAA GCCCGCGGTC
GCGCCCGGCG TGCGCGCCGC GTACGAGGCG GCGCAGGCGG TGCTGCGCGA CGGGGGCGCG
ATCCTCACCC CGGCGGCGCT GCCCGACCTG CCCTACGAGC CGCTCGCGTC GCTCTTCATC
GAGGCGGAGG CGGCGACCGC GTTCGAGGAG CTGATCCGCT CCGGCCGCAC CCGCGAGCTG
GCCGACCGCT CCCACGCGAC CCGCAAGCCC GACGACTACC TGCCCAAGGG CAACCCGTCC
GACTACGTCC GCGCCATGCG CGTGCGCGGC GAGGTGCAGC GCGCGCTGGC CGGGTTCTTC
GCCCGCCACG ACCTCGTGCT CGCGCCGAAC CTCCCGTACC CACCGCCGCG CGTCACCGAG
AACTTCGACG CGATGTTCGC GTTCCCGGAC CTCCTCGGCG CCGCCGGCAA CCTGGCCGGC
CTGCCGGCGG TGGCGCTGCC CATGGGCTTC GTGGACGGGC TCCCGGTGTC CATGCAGCTC
GTGGGCGCGC CGCTCGAGGA GGCGCGGGTG CTCGCCGCGG CGGCGCTGTT CCAGTCGCGC
ACCGACCACC ACCTGGCCCG GCCGAAGCTG GCCCGCCCGT CGCCGCCCTC GGCCCGCGAG
GGCGGGCGCC CCTCCCACGC GGTGACGATC CGATGA
|
|---|
| Protein sequence | MALDDDVLFS GVAALSRRIQ ARELSPVELA EAYLARIDAL GPALGCFVTV TRERALADAR
AAEADLAAGR WRGPLHGVPY GLKDLVDTAG IRTTFGARPY ADRVPEHDAT VARRLAEAGG
VLLGKLSMIE LAGGLGYHTG EAALNGPCRT PWDPTRWAGG SSSGAGSAVA AGLVPFAIGS
ETWGSITCPA AFCGVTGLRP TYGVLSRAGA MALSYTLDKL GPMARTAEDC ALVLGVLSGA
DPRDPTSIAP PPGLGNGKVR GGIPRGLRVA VLGFPEKPAV APGVRAAYEA AQAVLRDGGA
ILTPAALPDL PYEPLASLFI EAEAATAFEE LIRSGRTREL ADRSHATRKP DDYLPKGNPS
DYVRAMRVRG EVQRALAGFF ARHDLVLAPN LPYPPPRVTE NFDAMFAFPD LLGAAGNLAG
LPAVALPMGF VDGLPVSMQL VGAPLEEARV LAAAALFQSR TDHHLARPKL ARPSPPSARE
GGRPSHAVTI R
|
|---|
| |