| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3796 |
|---|
| Symbol | |
|---|
| ID | 3888293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 4349251 |
|---|
| End bp | 4352469 |
|---|
| Gene Length | 3219 bp |
|---|
| Protein Length | 1072 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637865353 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_466999 |
|---|
| Protein GI | 86160214 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCC CCTTCCGGCT GTTCGCCACC CTGGCGGCCT CGCTCGCGCT CGCGCTCGGC
GTCACGGCCC GCTTCGTCCG CGCCGAGCCC GAGGCGCCTC CGCCGGCGGT CGCGTTCAAG
GGCGCCGCGC CGGTGCCGGC GCGCGCCGGC GGCAACGGCG ACTACCAGCT CGAGCGGCTG
CCCATCCTGT CGAGGGTGAT CCTCCAGGTG AAGGACAACT ACGTCGATCC GGGCCGCGTG
GATCCGAAGG GCATGGTGGT CGCGGCGCTC GAGGCGGTCG AGAAGACCGT CGCCGAGGTG
ATGGTGCAGG GCGACGAGAA GTCGCCGAAG CTGACGCTCA CGGTGGGCAG CGCCTCCCGC
GAGCTCGACA TCTCCGGCGT GAAGAGCATC TGGGAGATCC GCACCGTCCT CGGCGAGGCG
ATGGGCTTCA TCCAGCAGCA CCTCGTCGCC CACAAGGACC TGCGCGAGAT CGAGTACGCC
GCGGTGAACG GCCTGCTCCA GACGCTCGAC CCGCACACCG TCCTGTTCGA CCCGAAGTCG
TTCAAGGAGA TGAAGCTCCA GACCCGCGGC GAGTTCGGCG GGCTCGGCTT CGTGGTGGCG
ATGCGCGACA GCAACCTGAC CGTGGTCCGG GTGCTCCGCA ACACGCCGGC GCAGCGCGCC
GGGGTGAAGC CGAAGGACGT CATCGCGCGC ATCGAGGAGC AGTCCACCGT CAACATGGAC
CTGCAGGACG CGGTGGACCG CCTGCGCGGC CGGCCGCAGA GCAAGGTGGC GATCACGCTC
CAGCGGCCGA ACCAGGAGCC GCGGCGCCTG GTGCTCACCC GCGAGGTGAT CAGCATCGAG
ACGGTGCCGC AGGCGCAGCT CCTCGACGGC AACGTGGGCT ACATCAAGCT CACCCAGTTC
TCCACCAACA GCACCCGCGA CCTGGTGCAG GCGCTCCAGC AGCAGCGCGC CCAGGCCGGC
GGCAAGCTGC AGGGCCTCGT GCTCGACCTG CGCGGCAACC CCGGCGGCCT GCTCGACCAG
GCCATCTCGG TGTCCGACCT GTTCCTCTCC GACGGCGTCA TCGTGAAGAC CGTGGGCGAG
GGCGACAAGC AGCAGATCCA CGAGGTGAAG GAGGCGAGCG CCGAGCCGTC CGACCTCACC
GGCCTGCCCA TCGTCGTCAT CGTCAACAAC AGCACCGCCT CCGCCAGCGA GATCGTCGCC
GGCGCGCTCA AGAACAACGG GCGCGCGCTG GTGATCGGCC GCCAGAGCTT CGGCAAGGGC
TCGGTGCAGG TGCTCTACGA CTTCAGCGAC CCGAGCCGCC CCGCCGACGA GGCCGCGCTC
AAGCTCACCA TCGCGCAGTA CCTCACCCCG GGTGACGTCT CCATCCAGGA GGTGGGCATC
ACGCCGGACG TGCTGCTGCT GCCGGGCCGC GCGCTGAAGG AGCAGGTCAA CTACTTCGCC
CCGCCGCGCT CGATGGGCGA GGCCGACCTC GACCGCCACC TCACCAACCC GGCCGACCGC
ACCGTCCCCG AGGCGGCCCG CGCCGAGGCG CGCAAGAAGC GCCAGGACAA GCCGCCGCTC
GAGCTGCGCT ACCTGCTCGA CGAGAAGGAG GACCTGGTCG CGAAGCAGCT CAAGAAGGAC
GCGGCGGCCG AGGCCTCCCC GCACGGCGAC GTGACCGAGC TGACGCCGGA GCAGCAGGAG
GACGAGGACG CCGACGCCGA TCCGGATCGC TTCGTCGAGG ACTACCAGAT CCGCTTCGCG
AAGGACCTGC TGCGCCGCGC GCCCTACCCG GATCGCGCGC GCCAGCTCGA GGCCGCCAAG
GCGCTCGTGT CCGAGCGGCA CCAGCAGGAG GAGGCGCGCC TGCAGAAGCG CCTCGCCGAG
CTGGGCGTGG ACTGGGCCGA CGGCCAGGCC GGCGGCCGCG GCCACCCGCG CGCGGTGGTG
ACCGTGTCGC CGCCGCCGGG CAAGGAGCTG CGCGCCGGCG AGACGATGCC GTGGACGGTC
ACGGTCGAGA ACCGCGGCGA CGCGCCGTTC CGGCGCCTCC GCGCCTGGAC CACCGCGGAG
AAGAACGGGC TGCTCGACCG CCGCGAGTTC GTGTTCGGCG CGGTGCGCCC GGGCGAGAAG
CGCACCTGGA CGGCGCCGGT GAAGCTGCCG AAGGGCATGG ACACCCGCCG CGACGAGGTG
ACGCTCCACT TCGAGGACGA GGGCGGCAAG GCGCCGCCGG ACGTCACCAC CGCGGTGGCG
GTCACCGAGG TGCAGAAGCC GGTGTTCGCG TTCAGCGCCC AGGTGGACGA CGCGAAGGGC
GGCAACGGCG ACGGGCTCCC GCAGCGCGGC GAGACGTTCA ACCTGCGGGT GGACGTGCGC
AACGCCGGCC CGGGCGTCTC CGGCGACAAG ACCTACGTGC TGCTGAAGAA CCTCGGCGAC
GAGAAGCTCT TCATCAAGAA GGGGCGCGAG GTGATCGGCG CGCTCAGGCC GGGCGAGGTG
AAGACCGCCA CCATGGAGGT CGAGCTCCGC CGCGGCTCGA AGAGCGACAC CTCGCCGGTC
CGCGTCACCA TCGTGGACGA GAAGATGGAC GAGTACGTCT CCGAGAAGCT CGACCTGCCG
GTGGCGACGG ACGAGCCGGC CCGCACCGCC GCGCACGGCG CGGTGCGCGT CGAGGTCGCG
GACGCCCAGC TCCGCACCGG CGCGAGCGCC ACGGCCCCGG TCATCGCGGC CGCGCGCAAG
GGCGCGGTGC TGCCGGTGGA CGCCCGCTTC GGCGAGTTCT ACCGGGTCGA GTGGCAGAAG
GGCCGCTACG CGTTCGCCGC CGAGGGCGAG GTGAAGCCGG TGAAGGCGGC CGGGCGGAGC
GGCACCGTGG CCGAGGTGTG GCAGCGCGAG CCGCCGCGCA TCGCGCTCTC GCCCGACCCG
CTGAAGGGCG CGCCGGTGGT GGACGGCACC ACCTTCAAGC TGCAGGGCTC GGCCAGCGTG
CCGCCCTCGG CGGATCCGAC CGCCCGCCTG CGCGACGTGT TCGTGTTCGT GAACGACCAG
AAGGTCTTCT TCAAGGTCCA GCCCGACGCG GCCACCTCCT CGAAGATGGA CTTCAGCGCC
GACCTGCCGC TCAAGCCCGG CAACAACGTC GTCACCGTGT TCGCCCGCGA GGACGACGAG
TTCCAGAGCC GCCGGAGCGT GGTGGTGTTC CGCCGCACGC CGCCGGAGGT CGCCGCCGAG
GCCGGGCGCG GGCAGGCGCA GCGGACCAAC GCGCAGTAG
|
|---|
| Protein sequence | MIRPFRLFAT LAASLALALG VTARFVRAEP EAPPPAVAFK GAAPVPARAG GNGDYQLERL
PILSRVILQV KDNYVDPGRV DPKGMVVAAL EAVEKTVAEV MVQGDEKSPK LTLTVGSASR
ELDISGVKSI WEIRTVLGEA MGFIQQHLVA HKDLREIEYA AVNGLLQTLD PHTVLFDPKS
FKEMKLQTRG EFGGLGFVVA MRDSNLTVVR VLRNTPAQRA GVKPKDVIAR IEEQSTVNMD
LQDAVDRLRG RPQSKVAITL QRPNQEPRRL VLTREVISIE TVPQAQLLDG NVGYIKLTQF
STNSTRDLVQ ALQQQRAQAG GKLQGLVLDL RGNPGGLLDQ AISVSDLFLS DGVIVKTVGE
GDKQQIHEVK EASAEPSDLT GLPIVVIVNN STASASEIVA GALKNNGRAL VIGRQSFGKG
SVQVLYDFSD PSRPADEAAL KLTIAQYLTP GDVSIQEVGI TPDVLLLPGR ALKEQVNYFA
PPRSMGEADL DRHLTNPADR TVPEAARAEA RKKRQDKPPL ELRYLLDEKE DLVAKQLKKD
AAAEASPHGD VTELTPEQQE DEDADADPDR FVEDYQIRFA KDLLRRAPYP DRARQLEAAK
ALVSERHQQE EARLQKRLAE LGVDWADGQA GGRGHPRAVV TVSPPPGKEL RAGETMPWTV
TVENRGDAPF RRLRAWTTAE KNGLLDRREF VFGAVRPGEK RTWTAPVKLP KGMDTRRDEV
TLHFEDEGGK APPDVTTAVA VTEVQKPVFA FSAQVDDAKG GNGDGLPQRG ETFNLRVDVR
NAGPGVSGDK TYVLLKNLGD EKLFIKKGRE VIGALRPGEV KTATMEVELR RGSKSDTSPV
RVTIVDEKMD EYVSEKLDLP VATDEPARTA AHGAVRVEVA DAQLRTGASA TAPVIAAARK
GAVLPVDARF GEFYRVEWQK GRYAFAAEGE VKPVKAAGRS GTVAEVWQRE PPRIALSPDP
LKGAPVVDGT TFKLQGSASV PPSADPTARL RDVFVFVNDQ KVFFKVQPDA ATSSKMDFSA
DLPLKPGNNV VTVFAREDDE FQSRRSVVVF RRTPPEVAAE AGRGQAQRTN AQ
|
|---|
| |