| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3784 |
|---|
| Symbol | alaS |
|---|
| ID | 3888281 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 4333606 |
|---|
| End bp | 4336323 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637865341 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_466987 |
|---|
| Protein GI | 86160202 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0683735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCC CGACCGCCGC CGAGATCCGC GAGCTGTTCC AGCGCTACTT CGAGGAGCAC
GGCCACCGCC GCGTGGCGAG CTCCTCGCTC GTCCCGCAGA ACGACCCGAC GCTGCTCTTC
ACCAACGCCG GGATGGTCCA GTTCAAGGAC GTGTTCACCG GCCGCGAGCG CCGCGACTAC
TCGCGCGCCA CCACCGCGCA GAAGTGCGTG CGCGCCGGCG GCAAGCACAA CGACCTCGAG
AACGTCGGGT TCACGGCCCG TCACCACACG TTCTTCGAGA TGATGGGGAA CTTCTCCTTC
GGCGACTACT TCAAGGCCGA CGCCATCGCC TGGGCCTGGG AGCTCGTCAC CAGCCCCGCC
TGGCTCGGCA TCGCGAAGGA CCGGCTCGCG GCCACGGTGT TCGCCGGCGA GGGGACGCTG
CCCTGGGACG AGGAGGCGTT CGAGCTGTGG AAGGCGCAGG GCGTGCCGGT CGAGCGCATC
CACAAGCTGG GCGCCAAGGA CAACTTCTGG GCCATGGGCG ACACCGGCCC GTGCGGCCCG
TGCTCCGAGC TGCACTACTT CCAGGGCAAC GACGTCCCGT GCGCCGAGGA GCAGGCCGGG
CGCAAGTGCC AGGGCGTGGC CTGCGACTGC GACCGCTGGC TGGAGATCTG GAACCTCGTG
TTCATGCAGT TCGAGCGCGG CCAGGACGGC GGGCTCACCC CGCTGCCCAA GCCCTCCATC
GACACCGGCG CCGGCCTGGA GCGCCTCGCC GCGGTCGCGC AGGGCAAGCG CTCGAACTAC
GACACCGACC TGTTCCGCAG CATCATCCAC GCGGTCGAGG GGCTCTCCGA CAAGCGCTAC
GACGCCGCCT CGGACGACGG CGTCTCGATG CGCGTCATCG CCGACCACGC CCGCGCCACC
ACGTTCCTGG TGGGCGACGG CGTGCTCCCG TCCAACGAGG GGCGCGGCTA CGTGCTCCGC
CGGATCATGC GGCGCGCCAT CCGCCACGGG AAGCGGCTCG GGCTGGAGCG GCCGTTCCTG
GCGGCGGTGT GCGGGGCCGT GATCGACGAG ATGGGCGCGG CCTACCCGGA GACGCGGGAG
AACCGCGCGT TCATCGAGAA GGTGGCGCAG CAGGAGGAGG AGTCCTTCCG CCGCACGCTC
GACAAGGGGC TCGCCATCCT CGAGGGCGAG ATGCGCAAGC TCGTCCCCGA CGCGACCCAC
GACGGCAAGC CGGCCACCCC GGCGCCGGAC CGGGCCCGGC CGATCATCGA CGGCAAGGTG
GCGTTCCAGC TCTACGACAC GTTCGGCTTC CCGCTCGACC TGACGCGCGT CATCGCGGCG
GAGCGCGGGT TCGACGTGGA CGAGCAGGGC TTCGACCGGC ACATGGCCGA GCAGCGCGCC
CGCTCCGAGT GGAAGGGCTC GGGCGAGCAG GGCGTGGACG ACCTGCACAA GCAGATCGCG
GGCGAGCTCG GCGAGGTGAA GTTCCTCGGC TACGAGCTGC CGGCGGCCCG CGCGCAGGTG
AAGGCCATCC TCGCGAACGG CGCCCGCGTG GCGCGCGCCG GCAAGGGCGA CAAGGTCGAG
ATCGTCACCG ACGCGACCCC GTTCTACGGC GAGTCCGGCG GCCAGGTGGG CGACGTCGGC
CACATCACCG GCGCGGGGCT GGAGATCCGG GTGGACGACG CGCAGCGCCC GGTGCCGGGG
CTGGTCACGC ACGTCGGCGA GGTGCTGCGC GGCGAGGTGG CGGTGGGCGA CGCGGTGGAG
CTGTCGGTGG ACGACCGCCG GCGCGACCTC GTCCGCGCGA ACCACTCCGC CACGCACCTG
CTGCAGCTCG CGCTGCGCGA GGTGCTGGGC GAGCACGTGA AGCAGGCCGG CTCGGTGGTG
GCGCCGGACT ACCTGCGCTT CGACTTCTCG CACTTCCAGC CGGTCACCGA GGAGGAGCTG
GCCGCGGTGG AGCGGCGGGT GAACGAGCTC GTCCGCGAGA ACGCCGAGAC CGAGACCGCG
GTGCTGAAGC TGGAGGAGGC GCGCCACGCC GGGGCCATGA TGATCTTCGG CGAGAAGTAC
GGGGACGTGG TGCGCGTGGT CCGCATCGGC CCGTCCAAGG AGCTGTGCGG CGGCACGCAC
GTGCGCCGGT CGGGCGACAT CGCGTTCTTC AAGATCGGCT CGGAGGAGTC GATCGCCTCG
GGCGTGCGGC GCCTGGTGGC GTACACCGGC GCGCGCGCGG TCGAGGTCCA GCAGCGCGAG
GCGGAGGAGC TGCGGCGCGC GGCGGCGCTG CTCAAGGCGG GCGCGCTCGA GGTCTCGCAG
AAGATCGAGC AGACGCAGCG GCGCGTGAAG GACCTGGAGC GCGCGCTGGA GGAGGCGCGC
TCGAAGGCGG CCGCGGCGCA GTCCGGCGAC CTCGCCGCGC TGGCGAAGGA CGTGGGCGGC
GCGAAGGTGC TGGCCGCGCG CGTGGAGGGC GACGGCAAGG CGCTCCGCGA GCTCGCCGAC
AAGCTGCGCG ACCGGCTGGG CAAGGGCGTG GTGGCGCTCG GCGCCGAGCA GGACGGCAAG
GCCATCCTGC TGGTGGCCGT GACCCGCGAT CTCACCGCGC GCCTGAAGGC CGGCGACCTC
GTGAAGGAGG CCGCGAAGCT GGTGGGCGGC TCGGGCGGCG GCAAGCCGGA CATGGCGCAG
GCGGGCGGCT CCGATCCGGC CGGCCTGGAG AAGGCGCTCG AGAAGGTGGC GGAGCTGGCG
GCGCGCGCGC TCGCGTGA
|
|---|
| Protein sequence | MKTPTAAEIR ELFQRYFEEH GHRRVASSSL VPQNDPTLLF TNAGMVQFKD VFTGRERRDY
SRATTAQKCV RAGGKHNDLE NVGFTARHHT FFEMMGNFSF GDYFKADAIA WAWELVTSPA
WLGIAKDRLA ATVFAGEGTL PWDEEAFELW KAQGVPVERI HKLGAKDNFW AMGDTGPCGP
CSELHYFQGN DVPCAEEQAG RKCQGVACDC DRWLEIWNLV FMQFERGQDG GLTPLPKPSI
DTGAGLERLA AVAQGKRSNY DTDLFRSIIH AVEGLSDKRY DAASDDGVSM RVIADHARAT
TFLVGDGVLP SNEGRGYVLR RIMRRAIRHG KRLGLERPFL AAVCGAVIDE MGAAYPETRE
NRAFIEKVAQ QEEESFRRTL DKGLAILEGE MRKLVPDATH DGKPATPAPD RARPIIDGKV
AFQLYDTFGF PLDLTRVIAA ERGFDVDEQG FDRHMAEQRA RSEWKGSGEQ GVDDLHKQIA
GELGEVKFLG YELPAARAQV KAILANGARV ARAGKGDKVE IVTDATPFYG ESGGQVGDVG
HITGAGLEIR VDDAQRPVPG LVTHVGEVLR GEVAVGDAVE LSVDDRRRDL VRANHSATHL
LQLALREVLG EHVKQAGSVV APDYLRFDFS HFQPVTEEEL AAVERRVNEL VRENAETETA
VLKLEEARHA GAMMIFGEKY GDVVRVVRIG PSKELCGGTH VRRSGDIAFF KIGSEESIAS
GVRRLVAYTG ARAVEVQQRE AEELRRAAAL LKAGALEVSQ KIEQTQRRVK DLERALEEAR
SKAAAAQSGD LAALAKDVGG AKVLAARVEG DGKALRELAD KLRDRLGKGV VALGAEQDGK
AILLVAVTRD LTARLKAGDL VKEAAKLVGG SGGGKPDMAQ AGGSDPAGLE KALEKVAELA
ARALA
|
|---|
| |