| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3754 |
|---|
| Symbol | |
|---|
| ID | 3886490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 4301175 |
|---|
| End bp | 4303661 |
|---|
| Gene Length | 2487 bp |
|---|
| Protein Length | 828 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637865311 |
|---|
| Product | formate dehydrogenase alpha subunit |
|---|
| Protein accession | YP_466957 |
|---|
| Protein GI | 86160172 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGGTC TGGCCCCCAC GTTCGGCCGT GGCGCGATGA CGAACAGCTG GGTCGACATC
AAGAACGCCA ACCTCGTCCT CGTCATGGGC GGCAACCCCG CCGAGGCCCA CCCCTGCGGC
TTCAAGTGGG TGGTCGAGGC GAAGGCCCAC AACAAGGCGC AGCTCATCGT GGTGGACCCG
CGCTTCACGC GCACCGCCGC GGTGGCCGAC GTCTTCGCGC AGATCCGCCC GGGCACCGAC
ATCGCGTTCC TGGGCGGCGT CATCCGCCAC CTGCTGGAGA AGGAGGCGAT CCAGAAGCAG
TACGTGGCCG CGTACACGAA CGCCTCGCTG ATCGTGAAGG AGGGCTACGG CTTCCAGGAC
GGCCTGTTCT CCGGGTACGA CGAGGCGAAG CACACGTACG ACAAGTCCAC CTGGTCGTAC
GAGACCGGCC CGGACGGCTT CGCGAAGAGC GACCCGACGC TGCAGGACCC GCGCTGCGTG
TTCCAGCTCA TGAAGAAGCA CTACGCGCGC TACACGCCGA AGATGGTGGC GGACATCACC
GGCGTGCCCG AGGCGACGTT CACGCGCATC TGCGACGCGA TCGCCACCAC CTCGGCGCCG
GACCGCACCA TGACGGCGCT GTACGCGCTC GGCTGGACGC AGCACTCGGT CGGCTCGCAG
AACATCCGCT CGATCGCGAT GATCCAGCTG CTGCTCGGCA ACGTGGGCAT GGCCGGCGGC
GGCGTGAACG CGCTGCGCGG CCACTCCAAC ATCCAGGGGC TCACCGACCT CGGCCTGCTC
TCCGACCTGC TGCCCGGCTA CCTGACCGTG CCGCGGGACG CGGACCCCGA CGTCGAGACG
TACCTGGCGA AGCGGACGCC GAAGCCGCTC CGGCCCGGCC AGATGAACTA CTGGCAGAAC
TACCCGAAGT TCTACGTGTC GCTGATGAAG GCCTGGTACG GGAAGGCCGC GACGAAGGAG
AACGGCTGGG CGTACGACTA CCTGCCCAAG CTCGACAAGG TCTACGACAT CCTCGCGGTC
TTCGACCTGA TGCACCAGGG CAAGGTCAAC GGGTACCTCT GCCAGGGCTT CAACCCGCTC
GCGTCGATCC CGAACAAGCC CAAGCTGCTC GAGTCGCTCT CGAAGCTGAA GTACCTCGTC
ACCATCGACC CGCTCGTCAC CGAGACCTCG AACTTCTGGC AGAACCACGG CGACCTCAAC
CCGGTCGAGC CCGCGAAGAT CCAGACCGAG GTGTTCCGGC TGCCCTCGAG CTGCTTCGCC
GAGGAGGACG GCTCGCTCGT CAACTCCGGG CGCACGCTGC AGTGGCACTG GAAGGCGGCC
GAGCCGCCGG GCGAGGCGAA GGGGGACGCC GAGATCGTCG CGGCGCTCTT CATGCGGCTC
CGGGCGCTCT ACGAGAAGGA GGGCGGCGCC TTCCCGGATC CGATCCGCGA CCTGACCTGG
GAGTACAAGA TCCCGCGCTC GCCGTCGGCC GAGGAGCTCG CCCGCGAGTT CAACGGCAAG
GCGCTCGCGG ACGTGAAGGA TCCCAAGGCG GACCCGAAGG ATCCGAAGGC CCCGCTGCTG
GCGAAGGAGG GCGAGCAGCT CGCCACGTTC GCGCACCTGC AGGACGACGG CACCACCGCG
TCCGGGAACT GGCTGTACTG CGGCTCGTTC ACGCAGGCCG GCAACCAGAT GGCGCGCCGC
GACGTCTCCG ACCCGAGCGG CCTCGGCGTC ACGCCGACGT GGGGCTGGTC GTGGCCGGCC
AACCGCCGCG TGCTCTACAA CCGCGCCTCC TGCGATCCGT CCGGGAAGCC CTGGGACAAG
AACCGCAAGC TGGTCTGGTG GAACGGCGCG AAGTGGGTCG GGCACGACGT GCCGGACTTC
AAGGTGGACT CGAAGCCCGA GGAGGGCATG TCGCCCTTCA TCATGAACCC GGAGGGCATG
GGCCGGCTGT TCGCGCTCGA CAAGATGGCC GAGGGGCCGT TCCCCGAGCA CTACGAGCCG
TTCGAGTCGC CGGCGGCGTC GAACGCGATG CACCCGAAGG TCGGGCCGAA CCCCGCCGCG
CGGATCTTCC CCGGCGACAA GGCGCAGCTC GGGCTCCCGG GCGAGTTCCC GTACGCCGCG
ACCACCTACC GCGTGGTGGA GCACTTCCAC TTCTGGACCA AGCACGCGCG CATCCCGTCG
GTGCTCCAGC CCGAGCTGTT CATCGAGCTG GACGAGGTGC TCGCCGGCAA GAAGGGCATC
CGCAGCGGCG ACGCCGTCGC GGTCCGGTCG AAGCGCGGCC GCATCGTGGG CAAGGCGGTG
GTCACGAAGC GCATCAAGCC CCTGAAGATC GCGGGCCAGG AGGTCCACAC CGTCGGCATC
CCCATCCACT GGGGCTTCGA CGGGCTCACC AAGCCCGGCT ACATCTCGAA CACCCTCACC
CCCTTCGTCG GCGACGCGAA CACCCAGACG CCCGAGTTCA AGGCGTTCCT GGTGGACGTG
GAGAAGGCCG CCGCGGGGCA GGTCTAG
|
|---|
| Protein sequence | MAGLAPTFGR GAMTNSWVDI KNANLVLVMG GNPAEAHPCG FKWVVEAKAH NKAQLIVVDP
RFTRTAAVAD VFAQIRPGTD IAFLGGVIRH LLEKEAIQKQ YVAAYTNASL IVKEGYGFQD
GLFSGYDEAK HTYDKSTWSY ETGPDGFAKS DPTLQDPRCV FQLMKKHYAR YTPKMVADIT
GVPEATFTRI CDAIATTSAP DRTMTALYAL GWTQHSVGSQ NIRSIAMIQL LLGNVGMAGG
GVNALRGHSN IQGLTDLGLL SDLLPGYLTV PRDADPDVET YLAKRTPKPL RPGQMNYWQN
YPKFYVSLMK AWYGKAATKE NGWAYDYLPK LDKVYDILAV FDLMHQGKVN GYLCQGFNPL
ASIPNKPKLL ESLSKLKYLV TIDPLVTETS NFWQNHGDLN PVEPAKIQTE VFRLPSSCFA
EEDGSLVNSG RTLQWHWKAA EPPGEAKGDA EIVAALFMRL RALYEKEGGA FPDPIRDLTW
EYKIPRSPSA EELAREFNGK ALADVKDPKA DPKDPKAPLL AKEGEQLATF AHLQDDGTTA
SGNWLYCGSF TQAGNQMARR DVSDPSGLGV TPTWGWSWPA NRRVLYNRAS CDPSGKPWDK
NRKLVWWNGA KWVGHDVPDF KVDSKPEEGM SPFIMNPEGM GRLFALDKMA EGPFPEHYEP
FESPAASNAM HPKVGPNPAA RIFPGDKAQL GLPGEFPYAA TTYRVVEHFH FWTKHARIPS
VLQPELFIEL DEVLAGKKGI RSGDAVAVRS KRGRIVGKAV VTKRIKPLKI AGQEVHTVGI
PIHWGFDGLT KPGYISNTLT PFVGDANTQT PEFKAFLVDV EKAAAGQV
|
|---|
| |