| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3514 |
|---|
| Symbol | carB |
|---|
| ID | 3886873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 4031993 |
|---|
| End bp | 4035196 |
|---|
| Gene Length | 3204 bp |
|---|
| Protein Length | 1067 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637865068 |
|---|
| Product | carbamoyl phosphate synthase large subunit |
|---|
| Protein accession | YP_466717 |
|---|
| Protein GI | 86159932 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
|---|
| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.191871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCC GCGAAGACGT GAAGAAGGTC CTGATCATCG GCTCCGGCCC CATCGTCATC
GGCCAGGCCT GCGAGTTCGA CTACTCCGGC ACGCAGGCGT GCAAGGCGCT GCGCAAGCTC
GGCTACCGCA TCGTCCTCGT CAACTCCAAC CCGGCCACGA TCATGACGGA CCCGGGCATG
GCGGACGCCA CCTACGTCGA GCCGCTCGAC GTCGAGACGC TCACCCGGAT CATCGAGAAG
GAGCGGCCGG ACGCGCTGCT CCCGAACCTG GGCGGCCAGA CCGGCCTGAA CCTCTCCTCC
GAGCTCGCGC GCAAGGGCGT CCTCGACCAG TACGGCGTGC GCGTCATCGG CGTGAACCTC
GAGGCCATCC GGCGCGGCGA GGATCGCGAG ACGTTCAAGG AGACGATGAC GCGCCTCGGG
ATCGAGACGG CGCGCAGCGA GATCGCGACC ACGCTGGAGC AGGCCATGGC CGCCGGCCAG
CGCCTCGGGT TCCCGCTGGT GGTGCGGCCC GCGTACACCA TGGGCGGGAC CGGCGGCGGC
TTCGCCTACA ACGTCGAGGA GCTGGAGGAG ATCGCCGCGC GCGGCCTGCT CGCGAGCCCG
GTCTCGCAGG TGCTGGTGGA GGAGTCGGTG CTCGGCTGGG AGGAGCTCGA GCTCGAGGTG
GTCCGCGACG CGAAGGGCAG GAAGATCACC GTCTGCTTCA TCGAGAACGT GGACGCGATG
GGCGTCCACA CCGGCGACTC GTACTGCACG GCGCCCATGC TCACGATCCC GCCGGAGCTG
CAGGCGAGGC TCCAGGACCA GGCCTACCGG ATCGTGGACG CCATCGAGGT GATCGGCGGG
ACGAACGTCC AGTTCGCGCA CGACCCGCGC ACCGGCCGCG TGATCGTCAT CGAGATCAAC
CCGCGCACCT CGCGCTCGTC CGCGCTCGCC TCCAAGGCGA CCGGGTTCCC CATCGCGCTC
GTCTCGTCGA TGCTCGCCGC CGGCCTGACG CTGGACGAGA TCCCGTACTG GCGCGACGGG
ACGCTGGACC GGTACACGCC GTCCGGCGAC TACGTGGTGG TGAAGTTCTC GCGCTGGGCG
TTCGAGAAGT TCAAGGGCGT GCAGGACCGG CTCGGCACGC AGATGCGCGC GGTCGGCGAG
GTGATGTCGA TCGGCAAGAG CTACAAGGAG GCCTTCCAGA AGGCGATCCG GTCGCTCGAG
AACGGCCGGC CCGGCCTGGG CTTCGCGAAG GACTTCCACG AGCTGCCGCT GGAGGAGCTG
CTGGAGCGGC TGCGCGAGCC CACCAGCGAG CGGCAGTTCC TGCTGTACGA GGCGATCCGC
AAGGGCGCCG ACCTCGACCT GCTCGCGCAG CGCACGCACA TCAAGCGCTG GTTCCTCGAG
CAGATGAAGG AGCTCGTCGC GCTGGAGGAG GAGCTGCTCC GGCACGCGGG CCGGCTGCCG
CCGGACGACC TGCTGGTGCG CGCCAAGAAG GACGGGTTCG CCGACCGCTA CCTGGCGCGG
CTGCTCCGGG TCTCCGAGGC GGAGGTCCGC GACCGGCGCA CCGCGCTCGG CGTGGTCGAG
GGCTGGGAGG CGGTCCCGGT CTCCGGCGTG CAGGACGCCG CCTACTACTT CTCGACGTAC
CGGGCGCCGG ACGCGGTGCC GGCGAGGGCC GGCGCGAAGA AGGTCATGGT GCTGGGCGGC
GGCCCGAACC GCATCGGGCA GGGCATCGAG TTCGACTACT GCTGCGTGCA CACCGCGTTC
GCGCTGCGCG ACGCCGGCTA CCAGTCGATC ATGGTGAACT GCAACCCGGA GACGGTCTCG
ACCGACTACG ACACCGCCGA CCGGCTGTAC TTCGAGCCGG TCACGGTGGA GGACGTGCTC
TCCATCTACC GCAAGGAGCG CCCGGACGGC GTGATGGTGC AGTTCGGCGG GCAGACGCCG
CTCAACATCG CCCGCCAGCT CGAGCAGGCC GGGGTCCGCA TCCTGGGCAC CTCGCCCGAG
ACCATCGACC TCGCCGAGGA CCGCGAGCGC TTCAGCGCCG TGGTGCGCAA GCTCGGGATC
CCGCAGCCGG AGTCCGGCCT GGCGCGCGAC CTCGACGAGG CGCTCGCGCT GGCGGGGCGC
ATGGGCTACC CGCTCATCGT CCGGCCGTCG TACGTGCTCG GCGGGCGCGG CATGGAGGTC
GTGCACGACG AGGAGATGCT GCGCGAGTAC GTGCGCAAGG CGGTGGACGT CTCGCCGGAG
CGGCCGCTCT ACGTGGACCG CTTCCTGGTG GACGCGGTCG AGACCGAGGC GGACGCCATC
TGCGACGGGA CCGAGGCGTT CGTGCCCGCG GTGATGGAGC ACATCGAGCT CGCCGGCGTG
CACTCCGGCG ACTCCGCCTG CGTGATCCCG CCGGTGAACG TCGCGCCCGA GCACCTCGCC
ACCATCGAGG ACTACACGCG CCGCCTGGCG CTGGAGCTGG GCGTGGTCGG GCTCATCAAC
GTCCAGTACG CCATCGCGGA CGGCATCGTG TACGTGCTCG AGGCGAACCC GCGCGCCAGC
CGGACCGTGC CGCTCGTCAG CAAGGTCTGC GACCTCCCCA TGGCCCGCAT CGCCGCCCAG
GTGGTGCTCG GCATGCGGCT GAGGGACCTG AAGCTCGAGC GCCGCAAGCC CGGCTACTTC
GGCGTGAAGG AGGCGGTGTT CCCCTTCTAC ATGTTCCCCG AGGTGGACCC GGTGCTCGGG
CCCGAGATGC GCTCCACCGG CGAGGTGCTG GGCCTGGCGC GGAGCCCGGG GCTCGCGTTC
TTCAAGGCGC AGCAGGCCAC CCGCTCGCCG CTCCCGCTCG CCGGGACCGT GCTCGTCACC
GTGGCGGAGG CCGACAAGCC GCGGGTGGTG GAGGCCGTCC GCGAGCTCGC CGGCATGGGC
TTCCGCGTGA AGGCGACGCG GGGCACCCGC GACTACCTGG CGAGCCAGGG CATCGAGGCC
GAGCTGGTGC TGAAGCTGCA CGAGGGGCGG CCGAACCTCG CCGACGCCCT CCTGAACGGA
GAGGTGAGCC TGCTCGTCAA CACCCCCGCC GGCAAGCAGA GCACCCACGA CGACTCGTAC
ATCCGCAAGG CGGCCATCCG CGCCGGGGTC CCGTACGTCA CCACCGCCGC GGCCGCGGTG
ATGACGGCGA AGGGCATCGC GGCGCGGCGC GCAGGCGCGG AGGGCGTGCG GAGCCTGCAG
GAGTACCACG CGACGCTGCG CTGA
|
|---|
| Protein sequence | MPRREDVKKV LIIGSGPIVI GQACEFDYSG TQACKALRKL GYRIVLVNSN PATIMTDPGM
ADATYVEPLD VETLTRIIEK ERPDALLPNL GGQTGLNLSS ELARKGVLDQ YGVRVIGVNL
EAIRRGEDRE TFKETMTRLG IETARSEIAT TLEQAMAAGQ RLGFPLVVRP AYTMGGTGGG
FAYNVEELEE IAARGLLASP VSQVLVEESV LGWEELELEV VRDAKGRKIT VCFIENVDAM
GVHTGDSYCT APMLTIPPEL QARLQDQAYR IVDAIEVIGG TNVQFAHDPR TGRVIVIEIN
PRTSRSSALA SKATGFPIAL VSSMLAAGLT LDEIPYWRDG TLDRYTPSGD YVVVKFSRWA
FEKFKGVQDR LGTQMRAVGE VMSIGKSYKE AFQKAIRSLE NGRPGLGFAK DFHELPLEEL
LERLREPTSE RQFLLYEAIR KGADLDLLAQ RTHIKRWFLE QMKELVALEE ELLRHAGRLP
PDDLLVRAKK DGFADRYLAR LLRVSEAEVR DRRTALGVVE GWEAVPVSGV QDAAYYFSTY
RAPDAVPARA GAKKVMVLGG GPNRIGQGIE FDYCCVHTAF ALRDAGYQSI MVNCNPETVS
TDYDTADRLY FEPVTVEDVL SIYRKERPDG VMVQFGGQTP LNIARQLEQA GVRILGTSPE
TIDLAEDRER FSAVVRKLGI PQPESGLARD LDEALALAGR MGYPLIVRPS YVLGGRGMEV
VHDEEMLREY VRKAVDVSPE RPLYVDRFLV DAVETEADAI CDGTEAFVPA VMEHIELAGV
HSGDSACVIP PVNVAPEHLA TIEDYTRRLA LELGVVGLIN VQYAIADGIV YVLEANPRAS
RTVPLVSKVC DLPMARIAAQ VVLGMRLRDL KLERRKPGYF GVKEAVFPFY MFPEVDPVLG
PEMRSTGEVL GLARSPGLAF FKAQQATRSP LPLAGTVLVT VAEADKPRVV EAVRELAGMG
FRVKATRGTR DYLASQGIEA ELVLKLHEGR PNLADALLNG EVSLLVNTPA GKQSTHDDSY
IRKAAIRAGV PYVTTAAAAV MTAKGIAARR AGAEGVRSLQ EYHATLR
|
|---|
| |