Gene Adeh_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_3438 
Symbol 
ID3889465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand- 
Start bp3952384 
End bp3953358 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content79% 
IMG OID637864993 
Producthistone deacetylase superfamily protein 
Protein accessionYP_466642 
Protein GI86159857 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0165681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAGC GCGTCCTCCT CGTCTCCCAC CCCGACTGCC AGGCGCACGA TCCCGGCCCC 
GGGCACCCCG AGCGCCAGGC GCGGCTCGAG GCCGCGCTGG AGGCGCTCGC CGCGGACCCC 
GCCCTCGGCC CGGAGGTGCT GGAGCGGGTC GAGGCGGCGC GCGCGACCGA GCAGGCGCTG 
CTGCGCGTGC ACACGCCCGG GCACCTCGCC CGCGTGCGCG GCCACGTGGA GGCGGCCGCG 
CGCACCGGGA TGCTCGACTG GCTCGAGCCG GAGACGCCGG TGTCGGCGGG CTCGTGGCGG 
GCGGCGGTGG CGGCGGCCGG CGCGGCGATC GAGGCGGCCG AGCGGGTGGC GCGCGGCGAG 
GCGCGGGCGG CGTTCGCGCT GGTCCGGCCG CCCGGGCACC ACGCCTGGGC CGACCGCGCC 
GGCGGGTACT GCCTGCTCAA CAACGTCGCG ATCGCGGCGC GCGCGGTCCA GGCGGCGGGG 
CTGGCGCGGC GGGTGCTCGT GGTGGACTGG GACGTCCACC ACTGCGACGG CACGCAGTCG 
ATCTTCTGGG AGGACTCCGC GGTCTACGTG CTCTCCGTGC ACCTGTGGCC GCACTACCCG 
CACACGGGCG CGCCGGAGGA GCGCGGCGCC GGCGCGGGCG AGGGGACGAC CCGCAACGTG 
GCGGTGCCGC ACGGCACGCG CGCCCCTGAG CAGCGGCGCC TGTTCGAGGA CGGGCTCGCG 
GCGGCGCTCG CGGAGTTCCG CCCGGACCTG GTGCTGCTCT CGGCCGGCTT CGATCCGCTG 
GAGGGCGATC CGGAGGGCGG CCTGCACCTC GAGCCCTCCG ACCTGCACGC GATGACCCGC 
ACGCTGGTGG AGCGCTGCGC CGCGGCGGAC TGCGATCGGA TCGCGGCGGT GCTGGAGGGC 
GGCTACGTCC CGCCGCGCCT GGGCGAGGGC GTGGTGCAGG TGGTGCGCGC GCTCGCCGGG 
CTGCCGGCGG CCTAG
 
Protein sequence
MPQRVLLVSH PDCQAHDPGP GHPERQARLE AALEALAADP ALGPEVLERV EAARATEQAL 
LRVHTPGHLA RVRGHVEAAA RTGMLDWLEP ETPVSAGSWR AAVAAAGAAI EAAERVARGE 
ARAAFALVRP PGHHAWADRA GGYCLLNNVA IAARAVQAAG LARRVLVVDW DVHHCDGTQS 
IFWEDSAVYV LSVHLWPHYP HTGAPEERGA GAGEGTTRNV AVPHGTRAPE QRRLFEDGLA 
AALAEFRPDL VLLSAGFDPL EGDPEGGLHL EPSDLHAMTR TLVERCAAAD CDRIAAVLEG 
GYVPPRLGEG VVQVVRALAG LPAA