Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3410 |
Symbol | |
ID | 3889418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 3923257 |
End bp | 3923976 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637864965 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_466614 |
Protein GI | 86159829 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.072759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGAGC CGGTGGCCAC GCCCACGGTG GAGCTCTCCG GCGTCCGCAA GGACTACGTG GCCGGCCCGG TGGTCACGCC GGTGCTGCAC GGCGTGGACC TCACGGTGGG CGCGGGGGAG TTCACCGCGC TCATGGGCCC GTCCGGCTCC GGGAAGTCCA CGCTGCTCAA CCTCATCGGC CTGCTCGACC GGCCCACCGG CGGCCGCGTG CGGGTGGCGG GCCTCGACAC CGCCGCGCTG GACGACGACG CCATGGCGCG CACGCGCGGG CGCACCATAG GGTTCGTGTT CCAGTTCCAC CACCTGCTGC CCGCGTTCAC CGCCCTCGAG AACGTCATGA TCCCGATGAT GGCGGCGCGC GGGCGGGCGG CCCCGGACAT GGCCGAGTGC GGGGAGCACC TGCTCCGGCA GGTGGGCCTC GGCGCGGTGC TGCACCGCCG CGCCACCCAG CTCTCCGGCG GCCAGCAGCA GCGGGTCGCG ATCGCCCGCG CCCTGGCCAT GGCGCCGCGG CTGGTGCTGG CCGACGAGCC CACCGGCAAC CTCGACACCC ACGCCGCGGA CGAGGTGTTC GCGCTGCTGC GCGAGTTCAA CCGCCGGGCC GGCATCACGT TCCTGATCGT GACGCACGAC CCGCGGCTCG CCGACCGCTG CGATCGCATC GTCGAGCTGG TGGACGGGCG CATCGTGGCC GACGGGCCCC ACCGGAGGAG CGGAGCATGA
|
Protein sequence | MAEPVATPTV ELSGVRKDYV AGPVVTPVLH GVDLTVGAGE FTALMGPSGS GKSTLLNLIG LLDRPTGGRV RVAGLDTAAL DDDAMARTRG RTIGFVFQFH HLLPAFTALE NVMIPMMAAR GRAAPDMAEC GEHLLRQVGL GAVLHRRATQ LSGGQQQRVA IARALAMAPR LVLADEPTGN LDTHAADEVF ALLREFNRRA GITFLIVTHD PRLADRCDRI VELVDGRIVA DGPHRRSGA
|
| |