| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3389 |
|---|
| Symbol | |
|---|
| ID | 3889455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3898811 |
|---|
| End bp | 3900595 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 637864944 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_466593 |
|---|
| Protein GI | 86159808 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGC GCGCCCTCCT CTACCGGCTC CGCTCCTGGT TCTACCGCCG GGACGTGACG
CTCTGGTACG ACCCGCGCTA CCGGCTTCCG CTCTCCGGCC TGGAGTCCGG GGCCGGCATG
GAGCCGCGCC GCGCGGACTT CGTGGCCTGG TGGCTGGCCG AGTGCGGCGC GGTGCCGCGC
GCCCGGCGCC GCGCGCCGCG GCGGATCTCG TTCGAGGACC TGGCGCGCGT CCACGACGCG
GAGCTGCTCG AGTCGCTGGG CCACCCCGAC ACGCTGGCGC GCGTGTTCGC GGTGGACCCG
TCCGACGTGC CGGTGGACGA GGTGATGACC ACGGTGCGCC TGGCCTGCGG CGGCACGCTG
GGCGCGGCGC GAGAGACGCT CCGGACGCGC GCGCCCGCGG TCAACCTGCT GGGCGGCTTC
CACCACGCGT TCCCCGGCGC GGCCGGCGGG TTCTGCCCGG TCAACGACGT CGCCGTCGCG
ATCGCCGCGC TCCGCGCCGA CGGGTTCACG GGCCGCGTGG CGGTCCTCGA TCTCGACGCG
CACCCGCCCG ACGGCATCGC CGCCTGCCTG GCGCGGGATC CCGATCACTG GATCGGCTCC
ATCTCCGGGT CGGACTGGGG GCCGCTCGAG GGCGTGGACG AGACGGTGCT CCCGCCCGGC
AGCGGCGACG CCGCCTACCT CGAGGCGCTG GGCGCGCTGC TCTCGCGGAT GCCCCGGCCG
CAGCTCGCGT TCGTGCTGGC CGGGGGCGAC GTGCTGGCCG GCGATCGCTT CGGCCAGCTC
GGGCTCTCGC TGGACGGCGC GCGCGAGCGC GACCTGCTCG TCGCCGCCGA GCTGGACTTC
GTGCCCAGCG TGTGGCTGGC GGCGGGCGGC TACTCGCGGC GCTCCTGGCG CGCCCTGGCC
GGCACCGGCA TGGCGGTCGC GGCCGGCTCG CTGGCGCCCA TCCCGGACGA GTACGACCCG
CTCTCCGCCC GCTTCGAGCT GGTCTCCCAG CGGATCCTGC CCGGCGACCT GGGCGACACC
GGCGACATCA CCGCCGAGGA CCTCGAGGAG GCCCTCGGCA TGCGGCCGCG GCGCCAGCGG
CTGCTGCTCG GCTTCTACAC GGCCTCCGGG ATCGAGCACG CGCTGTTCCG CTACGGCGTG
CTGGAGCAGC TCGAGCGGAT GGGCTTCCGG CAGTTCCGGG TCGGGTTCGA CTCCGCCGGC
CTGGGCGAGC GGGTGCGGCT CCACGGCGAG GCGGAGGGGC AGGAGCACCT GCTCGTGGAG
CTGATCCTGG AGCGGCGGCA CGTCCTCGGG GTGGAGGTGC TGTTCGTCCA CTGGCTCTCG
CTGCGCAACC CGCGGGCGCA GTTCAGCGAC CGCCGGCCGC GCCTGCCGGG CCAGGAGGTG
CCCGGGCTCG GCCTGGCGCG CGAGGCCGGG TCGATGCTGG CGCGCATGGC CATCCGCCTC
GGGCTGGGCG GCGTCGCCTT CCGCCCGGCG CACTTCCACA CCGCCTACGC CGCCCGCCAC
GCGTTCGCGT TCATCGACCC GGAGCGGCAG GGGCGCTTCG AGGCGCTGGT GCGCGACCTC
GCGGCGGTGC CGCTGCTCGA GGCGACGCGC GCCGTCTCCG ACGGCCGCGT GCTCCTCGAC
GGGCGGCCCT ACGCGTGGGA GGCGGACGAG ATGGCGTACT GGCTGCGCGA GTCGCCGTCC
GAGCCGGGCG AGGTGGAGCG CGAGCGCGAG CGGGTCCGCT TCACGCTGCT GCCCGAGGCG
CCCCCGGCGG CGGTCAGGGC GCCGGCTCCG CCAGGAGCTG CCTGA
|
|---|
| Protein sequence | MRPRALLYRL RSWFYRRDVT LWYDPRYRLP LSGLESGAGM EPRRADFVAW WLAECGAVPR
ARRRAPRRIS FEDLARVHDA ELLESLGHPD TLARVFAVDP SDVPVDEVMT TVRLACGGTL
GAARETLRTR APAVNLLGGF HHAFPGAAGG FCPVNDVAVA IAALRADGFT GRVAVLDLDA
HPPDGIAACL ARDPDHWIGS ISGSDWGPLE GVDETVLPPG SGDAAYLEAL GALLSRMPRP
QLAFVLAGGD VLAGDRFGQL GLSLDGARER DLLVAAELDF VPSVWLAAGG YSRRSWRALA
GTGMAVAAGS LAPIPDEYDP LSARFELVSQ RILPGDLGDT GDITAEDLEE ALGMRPRRQR
LLLGFYTASG IEHALFRYGV LEQLERMGFR QFRVGFDSAG LGERVRLHGE AEGQEHLLVE
LILERRHVLG VEVLFVHWLS LRNPRAQFSD RRPRLPGQEV PGLGLAREAG SMLARMAIRL
GLGGVAFRPA HFHTAYAARH AFAFIDPERQ GRFEALVRDL AAVPLLEATR AVSDGRVLLD
GRPYAWEADE MAYWLRESPS EPGEVERERE RVRFTLLPEA PPAAVRAPAP PGAA
|
|---|
| |