| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3379 |
|---|
| Symbol | |
|---|
| ID | 3889445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3887022 |
|---|
| End bp | 3887924 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 81% |
|---|
| IMG OID | 637864934 |
|---|
| Product | pseudouridine synthase, RluD |
|---|
| Protein accession | YP_466583 |
|---|
| Protein GI | 86159798 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTACGC CCGCCGCGCC GGAGCTCCTG CGCGTGCCCC GCGAGGCGGC CGGCGCCCGG
CTGGACCGCT GGCTGGCCGC GGCGCTCGGC GCGACCGCGG AGCGCGCCCG CTGGCTGGTG
GAGACGGGCC GGGTGCGCAT CCGCGGGAAG ACCTGCTCGC CGCACCGCAA GCTGTTCGGC
GGCGAGGAGG TCGCGGTCGA GCGCCCCGCC CCGCGCGCCG CCGAGGCGTC GGGCCCGGCG
CTGGCGGTGC TGTACGACGA CGCGGACTGC CTGGTCGTCG CGAAGCCGCC CGGGCTCGCG
GTGGAGGCGG GGGCGCCCGG GGGCGCGTCG GCCGTGGCGG CGGCGAGCCG GCTCGGCGCG
TTCGACGTGG ACGGCCGCGC CGCGCCCGGC CTGGCGCACC GGCTCGATCG CGACACGAGC
GGCGCGCTGC TGCTGGCGCG CCACGACCGG GCGCTGGCGG CGCTGCGCGC CGCGTTCGAG
GCCGGCGCGA TCGAGAAGGA GTACCTGGCG CTGGTGGCGG GCGCCCCGCC GCCGGAGGGG
CGGCTCGACA CGCCCTACGG CCGCGACCCG GAGGACCCGC GCCGCTTCAC CACCCGCTTC
CCGTCCCCGC GGCGCGCGCG GCTGTCCTGG AAGGTGGAGC GCCCGCTCCG CGGCGCCGCG
CTCCTGCGGG TCCGGCTGGA GACCGGGCGC ACCCACCAGA TCCGCGTGCA GCTCGCAGAG
GCCGGGTTCC CGGTGCTGGG CGACGCGGTG TACGGGGTCC GCGGCGAGGC GATCGCGCGG
CAGGCGCTCC ACGCCGAGCG GCTGGCGTTC CCGCGCCCGT CGGACGGCGC GCGCGTGGAG
GTGCGCGCGC CGGTGCCCGA GGACCTGGAG CGCGCGATCG CGGCGCTCGC GGCCGCCCCG
TAG
|
|---|
| Protein sequence | MGTPAAPELL RVPREAAGAR LDRWLAAALG ATAERARWLV ETGRVRIRGK TCSPHRKLFG
GEEVAVERPA PRAAEASGPA LAVLYDDADC LVVAKPPGLA VEAGAPGGAS AVAAASRLGA
FDVDGRAAPG LAHRLDRDTS GALLLARHDR ALAALRAAFE AGAIEKEYLA LVAGAPPPEG
RLDTPYGRDP EDPRRFTTRF PSPRRARLSW KVERPLRGAA LLRVRLETGR THQIRVQLAE
AGFPVLGDAV YGVRGEAIAR QALHAERLAF PRPSDGARVE VRAPVPEDLE RAIAALAAAP
|
|---|
| |