| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3334 |
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| Symbol | |
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| ID | 3889370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | + |
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| Start bp | 3833295 |
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| End bp | 3834959 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 637864883 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_466538 |
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| Protein GI | 86159753 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1716] FOG: FHA domain
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.448587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAGC TTGCCTTCTT CCGCCACGGC GAGGAGCTGC TGCGCGTCAC GCTCACCGAT
CGCACCGCGC TCGGCAGCGG CCCGGAGTGC GACGTCTCGC TGCCCGATCC CGCGCTCGCC
CGCGTGCAGG CGGTGGTCGA GCGGCGCGCC GACGGGTGGT GGCTGGTGGA CCGCTCCGGC
GCGGGCACCG CGGTGGGCGG GACGCCGGCG CGCGAGGCGC GGCTCGCCGA CGGCGCCGAT
CTCGCGCTCG GCGCGTGGCG GGCGCTGTTC CGCGCGGCCG AGGGCGTCGC GCCGGGCGCG
GGCGAGACGC GGCTGCGCGC GCCCGAGGAG GCGGCCGCCG CCGCGCCGCC GCCCGCGCGG
CTCCGGCTCC GCGCCGGCGG GCGCGAGCGC ACCGTCCCGG TCACCGCCGC GGGCGTGGTG
GTGGGCAAGG ACCCGACCTG CGACGCGCCG CTCGACGACC CGTTCGTCTC GGCCCGCCAC
CTGCGCGTGG AGGCGCGCGG CGGACGGTGG GCGCTCGCGG ACCTCGGCTC GACGAACGGC
ACGTTCATCA GCGGCGCGCG CGTGACGCGG GCGGAGCTGC CGTTCGGCCT GCCGGTGCAG
CTCGGGGACG CGGAGATCGT GCTCGAGCCG CGCGAGGCGC CCGAGCCCGC CCGCGCCGAG
GCGTTCGAGG GGATGATCTC GCGCGACGGC GCCATGCGGC AGGCGTTCGA GCTGGTGGAG
CGGGTCGGCC CCTCGGAGGC GGCGGTGACC ATCCTCGGCG AGACCGGCAC CGGCAAGGAG
CTGTTCGCCC GCGCGCTGCA CGCGCGCTCC GCGCGGCGGG ACGGGCCGTT CATCCCGGTG
AACTGCTCGG CCATCGCCGA GACGCTCATC GAGTCCGAGC TGTTCGGCCA CGAGAAGGGC
GCGTTCTCGG GCGCGGAGCG CATGCGCAAG GGCGCGTTCG AGGAGGCCGA CCGCGGCACG
CTGTTCCTGG ACGAGATCGG CGAGCTGCCG CTCGACCTGC AGCCGAAGCT GCTGCGGGTG
CTCGAGCTGG GCGAGGTGAA GCGGGTGGGC GCGTCCCGGC CGATCCAGGT GAGCGTCCGC
ATCGTGGCCG CCACGCACCG CGACCTGCGC GCGCAGGTGC GCGCAGGACG GTTCCGCGAG
GACCTGTTCT ACCGGCTCTG CGTGGTGCCC ATCACCGTCC CGCCGCTGCG CCGGCGCGCC
GGCGACGTGC GGGAGCTGGC GGAGGCGTTC CTGGCGCGCG CGGCGCCGCG CGGGGTGGCG
CTGCGCTGGA GCGAGGAGGC GCTCGCGAAG CTCGAGGCGT ACGACTGGCC CGGCAACGTC
CGGCAGCTCC GGAACGTGGT GCAGCGCGCG CTCCTGTTCC GCGGCGAGGG GCTGGCCATC
GGGCCGGCGG CGGTGACGTT CGAGGACACG CGCGCCGCGC CCGCCGACGG CGGCGACGAC
GACACGCTCT ACGTGCGCGG CCTCACGCTG GAGGAGATCG AGCGGGAGGC GATCCGCCTG
TCGCTGCGCC GCAACCGCGG CAAGCGCGCG GCGGTGGTGA AGGAGCTGCG CATCGCCAAG
AGCACCGTCA TGAAGCGGAT CGGCCAGTGG GGCCTGCACG ACGAGGGGCG TCCGCCGGGC
GAGGCGCCCG AGCCCGAGCC GGACGACGAG GCCGAGGTGG CGTGA
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| Protein sequence | MPELAFFRHG EELLRVTLTD RTALGSGPEC DVSLPDPALA RVQAVVERRA DGWWLVDRSG
AGTAVGGTPA REARLADGAD LALGAWRALF RAAEGVAPGA GETRLRAPEE AAAAAPPPAR
LRLRAGGRER TVPVTAAGVV VGKDPTCDAP LDDPFVSARH LRVEARGGRW ALADLGSTNG
TFISGARVTR AELPFGLPVQ LGDAEIVLEP REAPEPARAE AFEGMISRDG AMRQAFELVE
RVGPSEAAVT ILGETGTGKE LFARALHARS ARRDGPFIPV NCSAIAETLI ESELFGHEKG
AFSGAERMRK GAFEEADRGT LFLDEIGELP LDLQPKLLRV LELGEVKRVG ASRPIQVSVR
IVAATHRDLR AQVRAGRFRE DLFYRLCVVP ITVPPLRRRA GDVRELAEAF LARAAPRGVA
LRWSEEALAK LEAYDWPGNV RQLRNVVQRA LLFRGEGLAI GPAAVTFEDT RAAPADGGDD
DTLYVRGLTL EEIEREAIRL SLRRNRGKRA AVVKELRIAK STVMKRIGQW GLHDEGRPPG
EAPEPEPDDE AEVA
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