| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3276 |
|---|
| Symbol | |
|---|
| ID | 3888907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3749744 |
|---|
| End bp | 3750202 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637864824 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_466481 |
|---|
| Protein GI | 86159696 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGCG CCACGCTCGC CCTCGCGGCG CTGCTCGCGG CCCGCGGCCC CATCCCGTTC
GAGGCCGAGA TCGACGCGGC GCTCGCCGAG ACCTCCGCCA TCTACCCGGT CCCGAAGGCC
CTCGTGGTCG CGGTGATCTC TGTCGAGAGC AGCTTCCGCC CGCGCGCGGT CTCCCGTGCC
GGCGCGAAGG GCCTCATGCA GCTCATGCCG TACACGGCGC GCCGCGTCGG CATCGCGGAG
CGGGATCTGT TCGACCCGCG CCGGAACGTC CTCGGCGGTG TGCGGCTCCT CGCTGTGCTC
CTCCGCCACT ACGAGGGTGA TGTGATCGCC ACTCTGGTCG CGTACAACGC GCGGCCGCGC
CGGCTGTTCG CGCCGGTTCC TCGCAACGGC GAAACGCCGG CATACGTGTG GAAGGTACTC
GCGGCAACGC GGTTCTCGTT GCCGGTGGTC CGAAGCTGA
|
|---|
| Protein sequence | MMCATLALAA LLAARGPIPF EAEIDAALAE TSAIYPVPKA LVVAVISVES SFRPRAVSRA
GAKGLMQLMP YTARRVGIAE RDLFDPRRNV LGGVRLLAVL LRHYEGDVIA TLVAYNARPR
RLFAPVPRNG ETPAYVWKVL AATRFSLPVV RS
|
|---|
| |