| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3141 |
|---|
| Symbol | |
|---|
| ID | 3889102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3580886 |
|---|
| End bp | 3581626 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637864690 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_466347 |
|---|
| Protein GI | 86159562 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0523113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC TGAAGGGCAA GGTGGCGCTG GTGACCGGGG GCAGCCGTGG GATCGGGGCC
GCCATCGTGC GGCGGCTGGC GCGGGAGGGC GCGATGGTCG CGTTCACCTA CGTCAGCTCG
GAGGGGCCCG CCCGCAGCCT CGCGGAGGCG GTGGAGCGCG CGGGCGGCCG CGCGCGCGCG
TACCGCGTGG ACAGCGCCGA CCCGGTGGCG GTCGAGCGGA TCGTGGACGA GGTCGCCGCC
GAGCACGGGC GCCTCGACTT CCTCGTGAGC AACGCAGGCG TGGCGACGCT CAAGCCCGTC
GAGGAGACCA CCCTGGAGGA CTTCGATCGG ATCGTCGCGA CCAACCTCCG ATCGGTGTTC
GCGGGCGCGC GCGCGGCCGC TCGCCACCTG CGCGCCGGCG GGCGCATCAT CACCATCGGC
AGCGCCCACG ACGAGCGGGT CCCGTTCGCG GGCATCTCCG CGTACGCGGC CAGCAAGGCC
GCGCTCGTCG GCCTGACCAA GGGCCTGGCG CGCGATCTGG GCCCGCGCGG CATCAGCGTG
ACGCTGGTGT CGCCGGGCCC GATCGACACC GACATGAACC CGGCCAGCGG GCCGCTCGCC
TCCACCGTCC TGCCGATGAT GGCGCTGCCG CGGTACGGGA CGGGCGACGA CGTGGCCGGG
CTGGTGGCGT ACCTCGCCTC GGACGAGAGC GCGTTCGTCA CCGGCGTCTC GCTCGGCATC
GACGGAGGGT TCACCGCCTG A
|
|---|
| Protein sequence | MENLKGKVAL VTGGSRGIGA AIVRRLAREG AMVAFTYVSS EGPARSLAEA VERAGGRARA
YRVDSADPVA VERIVDEVAA EHGRLDFLVS NAGVATLKPV EETTLEDFDR IVATNLRSVF
AGARAAARHL RAGGRIITIG SAHDERVPFA GISAYAASKA ALVGLTKGLA RDLGPRGISV
TLVSPGPIDT DMNPASGPLA STVLPMMALP RYGTGDDVAG LVAYLASDES AFVTGVSLGI
DGGFTA
|
|---|
| |