| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3130 |
|---|
| Symbol | |
|---|
| ID | 3889149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3569794 |
|---|
| End bp | 3570732 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 637864679 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_466336 |
|---|
| Protein GI | 86159551 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.171352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTC CCATGGACGA GATGATCGAT CCGGGGGACC TGCGGCTCTT CGTGGCGGTG
GCGCAGCAAT CGAGCTTCGT GGGCGCGTCC CGGCGCACCG GCGTCCCCAC CAGCACGGTC
AGCCGCGCGG TGGCGCGCCT GGAGGAGCGG CTCGGGGTCC GCCTGCTGCA CCGCACCTCC
CGGCGCGTCT CCGCCACGGA CGAGGGGGCG CGGCTGCTCG CGCGCGCGGC GCCGCTGCTC
GAGCAGCTCC GGGACCTGCT CGAGGACGCG GCCGATCGCG AGGAGGAGCC CACCGGCCGG
CTGCGGGTGA CCGCGCCGGT GGTGACGGGC GCGGAGCGGG TCGGCCGGGC GCTCATCGCG
TACGCGGCGG CCCACCCGCG CGTCAGCGTG GACCTGCGGC TCACCAACTC GGTGCTGAGC
CTGGTGGAGG AGGCGATCGA CCTGGCGTTC CGGGTCGGCC CGGTCGCCGA GGCCGACGTG
GTGGCGCGCC GGCTCTGGGC GATCCCGTCC GCGCTGGCAG CCTCGCCCGA GGTGGTCGCG
CGCGAGCTGG GCGGCCGGCG GCGGGTGGAC GCGGCCGCGC TGGCGCGGGC GCCGGCGGTG
GTGACGCACC CGGGCCGGCC GTGGCGGTTC CGCGGTGCGG ACGGGGTGGT GCGCGAGCTG
ACGCCGAACG AGCGCTTCGC GGCGACCGAC CCGCGCGTCG CGGTGGAGGC GGCGCTGGCG
GGGATCGGCG TGGTGCGCGC GCCGGCCGAG ATGATCGCCC GCGCGGGCGG GCTGGTGGTG
CTGGAGTGCG CGCTGGGCGA GCCGGAGGGG CGGGAGCTGT TCGCGGTCTA CCCGTCGCGG
CGGCTCGTGC CCCGGCGCGT GCGCGACGCC ATCGAGTGGG TCCGGCGCAC GGGACCGGGC
GGCTCCGACG TCGCGCGGCG CCGGCGCCCG CCCGGCTGA
|
|---|
| Protein sequence | MLRPMDEMID PGDLRLFVAV AQQSSFVGAS RRTGVPTSTV SRAVARLEER LGVRLLHRTS
RRVSATDEGA RLLARAAPLL EQLRDLLEDA ADREEEPTGR LRVTAPVVTG AERVGRALIA
YAAAHPRVSV DLRLTNSVLS LVEEAIDLAF RVGPVAEADV VARRLWAIPS ALAASPEVVA
RELGGRRRVD AAALARAPAV VTHPGRPWRF RGADGVVREL TPNERFAATD PRVAVEAALA
GIGVVRAPAE MIARAGGLVV LECALGEPEG RELFAVYPSR RLVPRRVRDA IEWVRRTGPG
GSDVARRRRP PG
|
|---|
| |