Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3124 |
Symbol | |
ID | 3889143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 3563766 |
End bp | 3564770 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 637864673 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_466330 |
Protein GI | 86159545 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.093145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGCCG CGCTGGCGCT TCGCACCGGC GCGGTCCTCC GCTATGACCT CGCTCGCATG ATCACGGTCG ATCAGCTCGA GGCGCACCGG GCGGCGCTCA CCGGCCACTG CTACCGCATG CTGGGCTCCG CCGCGGAGGC GGACGACGCG GTCCAGGAGA CGCTGGTGCG CGCCTGGCGG AGCCTGGACC GCTTCGAGGG ACGCTCGTCG CTCCGCACCT GGCTGTACCG GATCGCCACC CGGGTTTGCC TGGACGCGCT GGAGGACCGG GCGCGGCGGG CCCGCCCGAT GGATCTCGGG CCGGCCGGGA CGGTGGCGGA CCCGCTGGAG GCGCTCCCCG GGGAGCGCTG GATCGAGCCC ATCCCCGACG TGCAGGCGCT CCCGGCCGAC GCCGATCCCG CCGAGCGCGC CCTCCTGCGG GAGAGCATCC GGCTCGCGTT CGTGGCCGCG CTCCAGCAGC TGCCGCCGCG GCAGCGGGCT GCGCTGCTGC TGGCCGACGT GCTGGGCTGG TCGGCCGCCG AGATCGCCGG CGACCTCGAC ACCTCGGTGG CGGCCGTGAA CAGCATGCTC CAGCGGGCCC GCGCGACGCT GCCGGCGCGG GATCCCTCCG GCCCGGGCGC CGCGCTGTCG CAGGCCGAGG CCGCGCTGCT CGAGCGCTAC GTGGAGGCGT TCGAGCGCTT CGACGTGGCG GCGCTCACCG CGACGCTGCG CGAGGACGCG TGCTTCTCCA TGCCGCCGTT CTCGCTCTGG CTGCGGGGCC GCGACGCGGT GGCGGCGTGG CTCACCGGGC CCGGCGCCGA GTGCCGCGGC TCGCGCCTGG TGCCCACCGC CGCGAGCGGC CTGCCCGCGT TCGCGCAGTA CCGGTCCGCC GGCCCCGGCC TCCACCGCCC GTGGGCGCTC CTCGTGCTGG AGCCGTCGCC CGGCGGGATC GCCGGCTGGA CCGCGTTCCT CGACACGGCC ACGCTGTTCC CGCGCTTCGG CCTGCCGGCC GAGCTCGGTT CCTAG
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Protein sequence | MGAALALRTG AVLRYDLARM ITVDQLEAHR AALTGHCYRM LGSAAEADDA VQETLVRAWR SLDRFEGRSS LRTWLYRIAT RVCLDALEDR ARRARPMDLG PAGTVADPLE ALPGERWIEP IPDVQALPAD ADPAERALLR ESIRLAFVAA LQQLPPRQRA ALLLADVLGW SAAEIAGDLD TSVAAVNSML QRARATLPAR DPSGPGAALS QAEAALLERY VEAFERFDVA ALTATLREDA CFSMPPFSLW LRGRDAVAAW LTGPGAECRG SRLVPTAASG LPAFAQYRSA GPGLHRPWAL LVLEPSPGGI AGWTAFLDTA TLFPRFGLPA ELGS
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