| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3062 |
|---|
| Symbol | |
|---|
| ID | 3889295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 3473725 |
|---|
| End bp | 3476676 |
|---|
| Gene Length | 2952 bp |
|---|
| Protein Length | 983 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637864611 |
|---|
| Product | spermine synthase |
|---|
| Protein accession | YP_466268 |
|---|
| Protein GI | 86159483 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0421] Spermidine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCC TCGTGTTCTT CCTCTTCTTC GTGTCGGGAT CTGCGGGGCT CGTCTACGAG
GTCGCCTGGG CTCGCTCGCT CGGCGTCGTG TTCGGCGCGT CACACCTCGC GGTCACCACC
GTCCTCTCGG TGTACATGGG CGGCCAGGCG CTCGGCGCGG CGCTGATCGG CGCCCGGGCC
GACCGCACCG AACGGCCGCT GAGGCTGTAC GGACTCCTGG AGCTCGGGAT CGGCGTGTCC
GCGCTCGCCT TCGTCGGGCT GATGCGCATC TACCCCGCGC TGTACGTCCC GCTGGCGCGC
GTCGCGGAGG AGAGCCCTCT CTACCTGACC GTGGTCCGAA CGACGTTCGC GGCGCTCGCG
ATCATCGTCC CGACGACGCT CATGGGGGGC ACGCTCCCCA CCTTGAGCCG ATTCTTCGCC
GCCCGGGAAG GCGGGCTCGC CAGGCAGCTC TCGCTCCTGT ACGGGTTCAA CACGCTCGGC
GCGGTCGTGG GCGCCCTGCT GGCCGGGTTC GTCCTGCTGC CGGGCCTCGG GGTCACCGCC
ACGTTGCTGG TCGCCGCGGG GGTGAGCATC ACGGCGGGTG CCGCGTCGGT CCTCCTGCAG
CGCGGGGAGT CGCTGGCCAA GGCGTCGCCG CTCGAGCCGG CCGCGGCCGA CGGTCCGGAG
GCGGCCGACG CCGGACGCGC CAGACCGGAT GGCTTCGCGG CCCGCCTCAC GCTCCTCGGC
ATCGGGCTGT CCGGGTTCTG CGCGCTCGGA TACGAGGTGC TCTGGACGCG CATGCTCACG
CTGGTGGTCG GGACCTCGGT CTACAGCTTC ACCGTGATGC TGGTGGCGTT CCTCGTCGGG
ATCGCGCTCG GAAGCTACGC GTTCGGCCCC GTTCGCCGGC TGTTCGGCGG TGAGAGGCAC
GCGGGCGTGC TGGTGTTCGG GTGCATCCAG GTCCTGATCG GCGTGTCGGC GCTCGCCGTC
ACCGTCCTCA TGCGCGACCT GCCGCTCACG GCCGGCCACA CCAGGGCGCT GCTGGCGGGA
CTCGAGCTGA CGCGCTTCGC CGAGCGCGTC GGCTCCTCGT TCGGAATCGC GTTCACGTAC
CTGCTGATAC CGTCCTTCCT GATGGGCCTG GCCTTTCCGG TCGCGGGGGC CGTCTGGTCG
GCTGGCCGTT CACGAACGGG AGCGGCGGTG GGCCGGCTCC TCACCGCCAA CACCGTCGGC
GCCATCCTCG GGTCGGCGAC CACCGGGTTC GCGCTCATCT ATCTCTTCGG GATCGAGCGG
TCGCTGCAGA TGCTGATCCT CGTGAACGTC ACGTGCGGCG TGGCGATCGC GCTCAGCGCC
TCGCGGCGGC GGTGGCCGGT CGCGGCCGTG GCCGCCCTCG GCGCCGCGCT CGTCGTGGCC
CGCGGCGCGG TGCCGTCCTG GGGACGCGTG TGGGATCAGA AGTTCTTCGC GACCTTCTCG
AACATGCGCC GGACGGTGGA CGACCCGGAG CGCGCGAAGG CGCGCCTCGA CGACGCGGAG
GTCCTCTACT ACCACGAGGG CGTGGACGAG ACCGTGAGCG TGATCCGCGC ACGGGGCGAC
ATCCAGCAGA CGTTCATCGT GAACGGGCGG CCGGAGGCCT CCAACGCGCC CATCGACGTG
CAGCTCCAGC GCGCGCTCGG CCACCTCCCG ATGTTGCTGC ATCGGAACCC GCGCAGCGTC
TTCGTCCTCG GGACCGGGAG CGGGATGACC CTGGGCGCGA CCTCGATCCA TCCGGAGGTC
GAGCGGATCG TCCTGGCGGA GATCGAGAAG GGCGTCCTGG GGGTGGCGCG CACGTTCTCG
GAGTGGAACG CGCACGTCCT CGACGATCCC CGGCTGCACA TCGTGTTCAA CGACGGCCGG
AACCACCTCG CCAGCACGCG ACGGAAGTTC GACGTCATCA CCTCGGACCC CATCCACCCC
TGGTCCGGCG GCGCGGCCTA CCTCTACACG GTCGAGTACT TCCGCACGGT CGCCGGGCAC
CTCGCGCCGG GCGGAATGGT CAGCCAGTGG CTTCCGCTAT ACGAGCTCTC CACCGGGGAC
GTGCGAACCG TGTTGCGGAC GTTCTCCGAG GCGTTCCCGT ACGTCCAGGT ATGGCTCACC
TACTACGACG CCGTGCTGAT CGGCTCGAAC GAGCCGATCC TCGTGGATGA GAGCGAGCTG
GAGCGGCGCC TCGCGAACCC CAGGATCCGC GACGACCTCG CGGCCGTCCA CATGGGGTCC
GTCCGAGATC TGCTCGCCTA CTTCGTGCTC GGGGACGCCG GCGCGCGCGA GTTCGCCCGG
GGTGGCGAGG TCAACACCGA CGACAACCTC ACGCTCGAGT TCTCGGCGCC GCTGTCCCAG
GGCGCGCTGA CGGCGGGGGG CAACGTCCTC GCGCTCACGG CCGCGCGAGA GAGCCTGGTC
CCGTACCTGG CCGGATCGCC CGCGGCAGGC CTTCGGAGGG CCGCGGTCGA TCGGTGGACG
CGCGACCTGG AGACCGCGCG CCTGTTCGAT CTCGCGCACG CGCAGTACCT CGCGGGCGAG
CAGACGAGCC CCGGATTCGC GGACCTGCTC GCCACGGTGC GCGTGCGCGA CCCCGGGTAC
GCGCCGCTCC TGTTCCTGCT CGACGAGGCG CAGTTCGAGG ATCGGCGTCA GCCGGTCGTC
GTGGCGGAGA CGTCGCTCGA CCTGCGCGAC GAGTCGGGTG CGCCGACGCG CGTACGCCTC
GCCGCGATCC GCACGTTCCT GGGACGGGGA CGGGTGCTCG TCTCGTTCGC CGACCTGGGC
GGTCGTGAGG TGTGGGCGAA GCGAATCGTC TGCGGTCGGT ACGAGCAGCT CGAGGACGAG
ACCGCGCAGT ACGCCAGCCG GATCCTCGGC GCTGCGCGGG CCGCGGCGTC CGAGGGAGCC
GCCACGGCGG ACGCCGTTCG CGAGGTCCTT CGGCGGGAGG CGAACCGGGG CGCGTGCCAG
CTCGAGCTGT GA
|
|---|
| Protein sequence | MRFLVFFLFF VSGSAGLVYE VAWARSLGVV FGASHLAVTT VLSVYMGGQA LGAALIGARA
DRTERPLRLY GLLELGIGVS ALAFVGLMRI YPALYVPLAR VAEESPLYLT VVRTTFAALA
IIVPTTLMGG TLPTLSRFFA AREGGLARQL SLLYGFNTLG AVVGALLAGF VLLPGLGVTA
TLLVAAGVSI TAGAASVLLQ RGESLAKASP LEPAAADGPE AADAGRARPD GFAARLTLLG
IGLSGFCALG YEVLWTRMLT LVVGTSVYSF TVMLVAFLVG IALGSYAFGP VRRLFGGERH
AGVLVFGCIQ VLIGVSALAV TVLMRDLPLT AGHTRALLAG LELTRFAERV GSSFGIAFTY
LLIPSFLMGL AFPVAGAVWS AGRSRTGAAV GRLLTANTVG AILGSATTGF ALIYLFGIER
SLQMLILVNV TCGVAIALSA SRRRWPVAAV AALGAALVVA RGAVPSWGRV WDQKFFATFS
NMRRTVDDPE RAKARLDDAE VLYYHEGVDE TVSVIRARGD IQQTFIVNGR PEASNAPIDV
QLQRALGHLP MLLHRNPRSV FVLGTGSGMT LGATSIHPEV ERIVLAEIEK GVLGVARTFS
EWNAHVLDDP RLHIVFNDGR NHLASTRRKF DVITSDPIHP WSGGAAYLYT VEYFRTVAGH
LAPGGMVSQW LPLYELSTGD VRTVLRTFSE AFPYVQVWLT YYDAVLIGSN EPILVDESEL
ERRLANPRIR DDLAAVHMGS VRDLLAYFVL GDAGAREFAR GGEVNTDDNL TLEFSAPLSQ
GALTAGGNVL ALTAARESLV PYLAGSPAAG LRRAAVDRWT RDLETARLFD LAHAQYLAGE
QTSPGFADLL ATVRVRDPGY APLLFLLDEA QFEDRRQPVV VAETSLDLRD ESGAPTRVRL
AAIRTFLGRG RVLVSFADLG GREVWAKRIV CGRYEQLEDE TAQYASRILG AARAAASEGA
ATADAVREVL RREANRGACQ LEL
|
|---|
| |