| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_3048 |
|---|
| Symbol | |
|---|
| ID | 3889204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3459984 |
|---|
| End bp | 3461387 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637864597 |
|---|
| Product | putative GAF sensor protein |
|---|
| Protein accession | YP_466254 |
|---|
| Protein GI | 86159469 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCCC CCGCGCCGCT CTCCGAGCTG CCGCCCACCT GCTTCCAGGG GATCGTCCCC
GCCGCGATCG CGACCTGCTC GCGCGCCGGG GAGCCCAACG TCACGTACCT GTCGCACGTG
CACCGGCTCG ACGATCGCCA CGTGGCGCTC TCCTGCCAGT TCTTCAACAA GACCAAGCGC
AACGTGCTCG AGCACCCGCA CGCCACCGTG CTGCTGCTCG ATCCGCTCAC GCTCGACAGC
TGGCGGCTGC GGCTCCGGTA CGATCACGCC GAGACCGAGG GGCCGCTGTT CGACGGCATG
GCGGTCCGCA TCCAGGCCAT CGCCTCGCAC ACCGGGATGG CCGGCGTGTT CCGGCTGCTC
TCCGCCGACG TCTACGAGGT GCTCGGCGTC GAGCGGCTGG ACGGCTTCCT GATGCCGCCC
GACCCGATGC TCGACGCCGA GCGCGCCGCG CCGGTCGCGT CCGGGCCGCT CACCGAGCTG
CGCGGGCTCC AGGCCGTGTC GGAGCGGATC AACCGCGCCG CGGACCTCGA GGCGCTCCTC
TCCGGCGCCA TGGCCGCGCT CGACGAGCTG CTCGGGTTCC AGCACGCCAT GGTGCTCGTG
CCCTGCGAGG CCGGCCACCT CGTCGCGATC GCCAGCCGCG GCTACGGGCC CGGCGGCATC
GGCGCGGAGG TGGCGCTCGG GGCCGGCATC ATCGGCACCG TGGCCGAGCG CCGGCGGATG
ATCCGCGTGG CCGGCGTCGG CGGGGAGCTC CGGTACGGGC GGGCCATCCG CGGGCGGGTG
GCCGAGGCCG GAGACGCGGC CGGGCTCGCG CCCGAGATCC CCCTCCCCGG CCTGCCCGAC
GCGCAGGCGC AGCTCGCGCT GCCGCTGCTC GTGGGCGACC GGCTGGTCGG CGTGCTCGCG
GTCGAGAGCC GCGATCCCCT CCAGTTCGAC GAATGGGACG AGGCGTTCCT GCAGATCGTC
GCGAACCAGA TCGCCATGGG CATGGACCGC ATGGCGGCGC TGGAGGAGGA CGCCGCGCCT
GCCGCCACGC CCGCCCCCGC GCCGCCGCGC CCCGCCCGCC CCGCGCCCCA CGCCCGCCGC
CGCACGCTCG TCTACTACCG GAACGACGAC TGCGTGTTCG TGGACGGCGA GTACCTGATC
CGGAACGTCC CCGGCAAGAT CCTGTGGAAG GTGCTCGGCC TCCACCGCGC CGAGGGGCGG
ACGGAGTTCA CCAACCGCGA GCTGCGGCTC GATCCCGGCC TCGGCCTGCC GCCGGTGAAG
GACAACCTGG AGAGCCGGCT CATCCTGCTG CGCAGGCGGC TGCTCGAGAA GTGTCCCGAC
GTGCGGCTCG TGCCCGTGCG CCGCGGCCGC TTCGCGCTGG AGCTCGACTG CGCGCTGGAG
CTGGTGGAGA AGGAGTGCGG GTGA
|
|---|
| Protein sequence | MTAPAPLSEL PPTCFQGIVP AAIATCSRAG EPNVTYLSHV HRLDDRHVAL SCQFFNKTKR
NVLEHPHATV LLLDPLTLDS WRLRLRYDHA ETEGPLFDGM AVRIQAIASH TGMAGVFRLL
SADVYEVLGV ERLDGFLMPP DPMLDAERAA PVASGPLTEL RGLQAVSERI NRAADLEALL
SGAMAALDEL LGFQHAMVLV PCEAGHLVAI ASRGYGPGGI GAEVALGAGI IGTVAERRRM
IRVAGVGGEL RYGRAIRGRV AEAGDAAGLA PEIPLPGLPD AQAQLALPLL VGDRLVGVLA
VESRDPLQFD EWDEAFLQIV ANQIAMGMDR MAALEEDAAP AATPAPAPPR PARPAPHARR
RTLVYYRNDD CVFVDGEYLI RNVPGKILWK VLGLHRAEGR TEFTNRELRL DPGLGLPPVK
DNLESRLILL RRRLLEKCPD VRLVPVRRGR FALELDCALE LVEKECG
|
|---|
| |