| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2794 |
|---|
| Symbol | |
|---|
| ID | 3890257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3165642 |
|---|
| End bp | 3166724 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 637864344 |
|---|
| Product | rhomboid-like protein |
|---|
| Protein accession | YP_466001 |
|---|
| Protein GI | 86159216 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.89322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCCTG GCGCCCCACG ACCTCGGGAC GGACTCGCCG CCCGGCTGCG CGCCGCGCCC
GGCACGGCGG CGCTCGCCGC CCTGGATCTC GCCGTCTTCG GGTGGGTGGC GGCCCATGGC
TCCACGACCG ACCCGGCGCT CCTCGCCCGC ATGGGCGCGC TCGATCATGC GCGCGTGTGG
GATGGCGAAC CCTGGCGGCT CCTCACCGCC GCGTTCCTGC ACGTCGGCCC CGTTCACCTC
GTGTGGAACC TGGCGTTCGG CGTGCCGCTC TGCGCCCTGG TCGAGCGGGC CATCGGCACG
CGCCGCTTCC TGGTCGTGTA CCTGGCGAGC GCGCTGGGCG GCTCCGCCGC CTCGATGCTG
GCCGCCATGC CGATGTCGGC GGGCGCCTCG GGGGCGCTGT TCGGCGTGGC CGGCGCCATG
CTGGCGCTGT ACCGCCGCGC GGTGGGCTCC TGGCGCGCCT TCCTGTCCTC GCGCGACATC
ATCCTGAACG GGATCATGCT CGTCGCGTTC GCGCTCGCCG GGCTGTTCCT GCCCATCGAC
GGGTGGGCCC ACGCCGGCGG GCTCGTCACC GGGGCGTGGC TGGGCTGGGT CGCCTCGCGC
CCGCCGCCGC GCCGCGCCCG CGCCTGGCTG CCGCCCGCCG CCGCGCTCGG GCTGGCGGTC
GCGCTGGCGC TGCGGCCGGA CCCGCGCTGG GCGGCGAACC GCGCCGAGCT GGAGGCGCTG
CACGCCGCGC TCCGCGACGG TGACCGGACG CGCGCACGCG CGGTGCTCGA CGCCGCGCGC
GCCCGCGGCA ACGACGCCGC CGGCCTCCCG TACTACGAGG GCCTGCTGCT CGCGCAGGAG
GGCGACCTGG AGGGCGCGCT GCAGCGGCTC CGGCCGCTCG CGTCCGCGTC GCGGGGGCCG
GCGCGCGACG AGGCGCGGAA GGCGCTGGCC GCGGTGTCGA AGCGGCTGGG GGTGCTGCTC
GTGCTCGGGG AAGGACGCCC TGCGGATCCG GAGCGCGGGC GGGCGCTGCT CGACGAGGCC
TGCGGCGCCG GGGACGCCGA CGCCTGCCGG CTCGCCGCGG AGGCCGCCGC GCTGCATCGA
TGA
|
|---|
| Protein sequence | MPPGAPRPRD GLAARLRAAP GTAALAALDL AVFGWVAAHG STTDPALLAR MGALDHARVW
DGEPWRLLTA AFLHVGPVHL VWNLAFGVPL CALVERAIGT RRFLVVYLAS ALGGSAASML
AAMPMSAGAS GALFGVAGAM LALYRRAVGS WRAFLSSRDI ILNGIMLVAF ALAGLFLPID
GWAHAGGLVT GAWLGWVASR PPPRRARAWL PPAAALGLAV ALALRPDPRW AANRAELEAL
HAALRDGDRT RARAVLDAAR ARGNDAAGLP YYEGLLLAQE GDLEGALQRL RPLASASRGP
ARDEARKALA AVSKRLGVLL VLGEGRPADP ERGRALLDEA CGAGDADACR LAAEAAALHR
|
|---|
| |