| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2785 |
|---|
| Symbol | |
|---|
| ID | 3890248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 3152900 |
|---|
| End bp | 3154504 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637864335 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_465992 |
|---|
| Protein GI | 86159207 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.634484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCA GGGGACCGTT CATCCACGAG TGGGTCGCGG AGCACGCGGC GCGGCAGCCC
GATGCGCCCG CCGTCGACAC GCCGGCGCAC CGCCTCACGT ACGGCGCGCT GGGCGAGCGT
GTGCGCGCGC TGTCCGCGCA GCTCGCGGCC GCCGGCGTCC GCCGCGGCGA CCGGGTCCTG
GCGGCGCTGC CCAACGTGCC GGCGACGGTG GTGGCCAGCC TCGCCGTGCA CGCGCTCGGC
GCCACGGCCG TCGAGGTGAA CCGCGAGTGG GGCCCCGACG TCCAGCTCGG CATCGCGCAG
GAGACGGGGG TCCGCCACGC GTTCGTGTTC GGGCGCGACG CCGTCGCCTG GGGCAAGGTG
GCCGCGGCGC ACCCGTTCGA TCGGCTGTGG GTGGTGCACG GGGGGCCGCT CCCGGAGCGG
CTCCTCTCCG ACGTCGGCGG CGCGCCGGCG ACGCTGCTGC TGGAGGACGG GCGCGTGGAT
CCCGCGCTGC CGCCCGCCCC CGCGCCGCCG CCCGCGGACG TCTCGGCCGA CGCGCCCGCG
CTGATCCTGT ACACGTCCGG CAGCACCGGC CGGCCCCGCG GCGTGGTCCA GACGTTCGGG
AACGTCGAGG CGAACTCGCG CTCCATCGTC GAGTACCTGG GCCTCACGTC CGCCGACCGC
GCGCTGCTCG TGCTGCCGCT CTACTACTGC TACGGGCGCA GCGTCCTCCA GACGCACCTC
CTGGCGGGCG GCTCCCTGTT CCTCGACTCG CGCTTCGCGT TCCCGCGCAC CGTGCTCGAG
GGCTTCGCGC GCGAGGGGTG CACCGGGTTC GCCGGCGTGC CGATGACGTT CGAGATCATC
CGGCGCCAGG TGGACGTGCG CTCGCTCTCG TTTCCCAGGC TCCGCTACCT GACGCAGGCC
GGCGGCGCGA TGGCGCCGGA GACGATCGAC TGGGTGCGCG AGGCGTTCGC GCCGGCGAAG
CTGTTCGTCA TGTACGGGCA GACCGAGGCG ACGGCCCGGC TCAGCTACCT GCCGCCGGAG
CGCGCGCGGG AGAAGCGCGG CGCCATCGGC ATCCCCATCC CCGGCGTCGA GCTCCGGGTG
GTGGACGAGC ACGGGCGCGA GCTGCCGAGC GGAGAGACCG GGCACCTGGT CGCGCGCGGG
AAGAACGTGA CGCTCGGCTA CTTCCGGGAC CCCGAGGCGA CCGCCGCCAT CCTGCACGAC
GGCTGGCTGT GGACCGGCGA CCTCGCGGAG CGCGATCCGG ACGGCTTCTT CTTCCACCGC
GGCCGCTCGA AGGAGATCCT CAAGATCGGC GGCCACAGGG TGAGCCCGAT CCAGATCGAG
CACGCCGTGG CCGAGCACCC GGAGGTCGCC GAGGCCGCGG TGATCGGCGC CCCGGACCCG
CTGAAGGGCG AGGTACCGGT CGCGTTCGTG GTGGCGCGGC CCGGCGCCAG CCCGACCGAG
GAGTCGTTGC GCGCGTTCTG CCAGGCCCGG ATGCCGGCCT ACCAGGTGCC GGTGCGGTTC
ACGGTGGTGG CGGCGCTGCC GCGCAACGAG TCCGGAAAGC TGCTGCGCGC GGCGCTGGTG
GAGTCGGCCG CGGCGGCCGC GGGCGGCGGC CGCGCGCGCG CCTGA
|
|---|
| Protein sequence | MHARGPFIHE WVAEHAARQP DAPAVDTPAH RLTYGALGER VRALSAQLAA AGVRRGDRVL
AALPNVPATV VASLAVHALG ATAVEVNREW GPDVQLGIAQ ETGVRHAFVF GRDAVAWGKV
AAAHPFDRLW VVHGGPLPER LLSDVGGAPA TLLLEDGRVD PALPPAPAPP PADVSADAPA
LILYTSGSTG RPRGVVQTFG NVEANSRSIV EYLGLTSADR ALLVLPLYYC YGRSVLQTHL
LAGGSLFLDS RFAFPRTVLE GFAREGCTGF AGVPMTFEII RRQVDVRSLS FPRLRYLTQA
GGAMAPETID WVREAFAPAK LFVMYGQTEA TARLSYLPPE RAREKRGAIG IPIPGVELRV
VDEHGRELPS GETGHLVARG KNVTLGYFRD PEATAAILHD GWLWTGDLAE RDPDGFFFHR
GRSKEILKIG GHRVSPIQIE HAVAEHPEVA EAAVIGAPDP LKGEVPVAFV VARPGASPTE
ESLRAFCQAR MPAYQVPVRF TVVAALPRNE SGKLLRAALV ESAAAAAGGG RARA
|
|---|
| |