| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2579 |
|---|
| Symbol | |
|---|
| ID | 3889889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 2908286 |
|---|
| End bp | 2910757 |
|---|
| Gene Length | 2472 bp |
|---|
| Protein Length | 823 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637864119 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_465786 |
|---|
| Protein GI | 86159001 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.08345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAGA CCGCTCACGA GCTCGGCCGG ATCGCCGTCA CGAACGTCGG CTACCTCTGG
CTCATCCCGC TGTTCCCGCT CATCGGCGCG ACCGTCAACG CGCTGATCGG CTGGAAGCTG
CAGCAGCTGT TCGGGAGGAA GATCGTCCAC CGCATCGCGG TGGCCGCGAT GCTGGCGGCC
TTCGGGGTGG CGCTGGTCGC GTTCGCCCAG ATGCTGCGGC TCCCCTCCGA GGAGCGCTTC
CTCCAGGACA CGCTCTGGAA CCTGATGACC GCCGGCCGCA TGACGGTGGA CTTCGGGTTC
GCGCTCGACC CGCTCTCGAT GATGATGGTG CTGGTCATCA CCGGGATCGG CTCGCTCATC
CACGTCTTCT CCATCGGGTA CATGCACGAC GAGCCGTCGT ACTGGCGGTT CTTCAGCTAC
CTGAACCTGT TCGTCTTCGC GATGTTGCTC CTGGTGATGG GCGACAACTT CGCGGTGATG
TTCTTCGGGT GGGAGGGCGT GGGCCTCGCC TCGTACCTGC TCATCGCCTT CTGGTACACG
GACCCCGAGA AGGCGAAGGC CGGCATGAAG GCCTTCGTGG CGAACCGCTT CGGCGACTTC
GGCTTCCTGG CCGGCCTGTT CCTGCTGTTC TGGGCCCTGG GCGGCGCATG GACGCCGCGG
ACCGGCAGCG GGCTGCGGAA CAACGACTAC CAGCCGCTCG CCGAGCTGAA CGCCACCGCC
GGCGCCGCCA CCGCCGCGCA GTCGCAGGCG CTCGCCCCGA GCGTCCACGA CGTGAAGGTC
GGCCCCACCA TGAACTTCCG CGAGCTGCGG GATCAGGTGG TGATCGAGTC CACCGGCGTG
AAGGAGCACC TGGCCGGCTC GAGCATCTGG GGCGTCTCGC TCCTGACGCT CGTCTGCGTC
CTCCTGTTCG TCGGCGCGAT GGGCAAGAGC GCCCAGATCC CGCTCTACGT CTGGCTCCCG
GACGCGATGG CGGGCCCGAC GCCGGTCTCC GCCCTCATCC ACGCCGCCAC CATGGTGACG
GCCGGCGTGT ACATGGTGGC GCGCCTCAAC TTCCTGTTCG CGCTCTCGGC GAGCGCGATG
GGCTGGGTGG CGCTCATCGG CGCCGCGACC GCGATCTTCG CCGCGTCGAT CGGCTTCTTC
CAGTACGACA TCAAGAAGGT CCTCGCCTAC TCCACCGTCT CCCAGCTCGG CTTCATGTTC
ATCGGGGTCG GCGTGGGCGC GTACTGGGCC GGCGCGTACC ACCTGCTCAC GCACGCGTTC
TTCAAGGCCA CGCTGTTCCT CGGCTCCGGC TCGGTGATCC TCGGCTGCCA CCACGAGCAG
GACATGCGGA AGATGGGCGG GCTGAAGAAG CACATGCCCA TCACGCGCTG GACCTACCTC
GCGGCGTGCT GGGCCATCGC CGGCTTCCCG TGGATGAACG GCTTCTACTC GAAGGACGAG
ATCCTCTACA AGGCGTTCAC CAGCGGGCAC CTGGCGCTGT TCGGCGTGCC CACCCCGTGG
CTCGGGCCGG CCATCTTCGT GGTCGGCATC ATCGCGGCGA CCGGCACCAG CTTCTACATG
TTCCGGTCGT ACTACATGAC GTTCACCGGC GAGTACCGCG GGAACGCCGG GCACCACGAC
GAGCACAACG AGGACCCGCA CTCCGCCGGC GCCGCCGCCA TGTCGCACCT GGCCGTCGCG
GTCCACGCCT CGGACGGCGC GGTCCACGCC GACGGCCACG CGCACGGCCA CGCCGCCCCG
GCCCACGGCC ACGCGGTCCA CGCCCCGGCC GCCGCCGCGG CGACCGCCCA CGCGCCGGCG
CACGACGACC ACGGCCACCA CGGCGGCACG CCGCACGAGT CGCCCTGGAC CGTCACGCTG
GTCCTCTCGC TGCTCGCGCT CGGCTCCTTC TTCACGCTGT TCCTGGGCAT CCCCATGGCC
TGGACCGGCA AGGCGCCCAT CCTCGAGCAC TGGCTCGCCC CGGCGCTCAC CGCGCAGGAG
GGCGTGCCGT TCCAGCACCT GTCGCACTCC ACCGAGTACA TGTTCCAGGC GATCGGCGTG
CTGGCCGGCG CGGTCGGCTG GTTCTTCGCG ATGCTGCTGT TCAAGGACGC GCGGAGCGAG
GTCCCGGCGC GGCTGCGCGA GAAGTTCCTG GGCGTCTGGA CGGTCGTCTA CAACAAGTAC
TACGTGGACG AGCTGTACGC GGTCGCCGTC CTGAAGCCGT CGATGAAGGT CGCGCAGGCC
GCGTCCTGGT TCGACTCGAA CGTGATCGAC CGCCTGGTGC TCCTGGCCGG CACGGTCACC
CGCGTGGTCG CCAACATCGA CGGCGCCATC GACAAGTACC TCGTGGACGG CGCGGTGAAC
GCCGTCGCCA GCGTCACCCA GGAGTGCGGC CGGTACCTCC GCTCGCTCCA GACCGGCAAG
GTCCAGACCT ACCTGTACGG CGCGCTCGGG GGCGCGCTGG TGGTGGTCCT GCTCAACTTC
CTCATCTCGT AG
|
|---|
| Protein sequence | MHETAHELGR IAVTNVGYLW LIPLFPLIGA TVNALIGWKL QQLFGRKIVH RIAVAAMLAA
FGVALVAFAQ MLRLPSEERF LQDTLWNLMT AGRMTVDFGF ALDPLSMMMV LVITGIGSLI
HVFSIGYMHD EPSYWRFFSY LNLFVFAMLL LVMGDNFAVM FFGWEGVGLA SYLLIAFWYT
DPEKAKAGMK AFVANRFGDF GFLAGLFLLF WALGGAWTPR TGSGLRNNDY QPLAELNATA
GAATAAQSQA LAPSVHDVKV GPTMNFRELR DQVVIESTGV KEHLAGSSIW GVSLLTLVCV
LLFVGAMGKS AQIPLYVWLP DAMAGPTPVS ALIHAATMVT AGVYMVARLN FLFALSASAM
GWVALIGAAT AIFAASIGFF QYDIKKVLAY STVSQLGFMF IGVGVGAYWA GAYHLLTHAF
FKATLFLGSG SVILGCHHEQ DMRKMGGLKK HMPITRWTYL AACWAIAGFP WMNGFYSKDE
ILYKAFTSGH LALFGVPTPW LGPAIFVVGI IAATGTSFYM FRSYYMTFTG EYRGNAGHHD
EHNEDPHSAG AAAMSHLAVA VHASDGAVHA DGHAHGHAAP AHGHAVHAPA AAAATAHAPA
HDDHGHHGGT PHESPWTVTL VLSLLALGSF FTLFLGIPMA WTGKAPILEH WLAPALTAQE
GVPFQHLSHS TEYMFQAIGV LAGAVGWFFA MLLFKDARSE VPARLREKFL GVWTVVYNKY
YVDELYAVAV LKPSMKVAQA ASWFDSNVID RLVLLAGTVT RVVANIDGAI DKYLVDGAVN
AVASVTQECG RYLRSLQTGK VQTYLYGALG GALVVVLLNF LIS
|
|---|
| |