| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2250 |
|---|
| Symbol | |
|---|
| ID | 3889600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 2543864 |
|---|
| End bp | 2544847 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637863788 |
|---|
| Product | sigma-24 (FecI-like) |
|---|
| Protein accession | YP_465457 |
|---|
| Protein GI | 86158672 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.840992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC CCCCAGAGCC GACCCCTCCC CTCGCCGGCG CCGTCCAGGC GTCCTGGCAC
CGCTTCCTCG ACACCTACGA GCCGCTGCGG CCGGAGCTCT ACCGGTACTG CCGCAGCCTG
GCGCGCAGCC CGTGGGACGC GGACGACCTG GTGCAGGACG CGATGGCGCG GGCGTTCGTG
ACGCTCGGCT GCATGGACGG CCCGCCGGAC AACCCGCGCG CCTGGCTGTT CCGGGTGGCG
TCGAACCTGT GGATCGACCG GCTCCGGCGC ACGCGCGAGG ACGCGGGGGA CGTGCCGGAG
GGCGCGGCCG CGCCCGAGCC GAGGGCGTCG CGCGAGGCGG CCGGCACGCT CATCGGCCGG
CTGTCGCCGC AGGAGCGCGC CGCGGTGGTG CTGAAGGAGG CGTTCGACCT GTCGCTGGAG
GAGATCGCCG AGGCGCTCTC CACCAGCGTC GGGGCGGTGA AGGCGGCGCT CCACCGCGGC
CGAGGGAAGC TGGCCGAGCC GGACGAGGCG CTCACCGCGG CCCCGAGCGC GCCGGTGCTC
GACGCGTTCT GCGCGGCGTT CAACGCCGGG GACCTCGAGC GGCTGGTGGC GCTCCTGCTC
GACACCGCCA GCGTGGAGGT GGTGCGCGTG CACGCCGAGT ACGGCCGCGA CGCCGCGCGC
AAGGGCGTGT TCCAGGGGAT GATGTACGGC AGCCGGCGGC TGGCCGGCGT GGACGGCCAG
ACCACCGGCA TCGACCCGCG CTACCGCCTC GGCGCCCTCC CCGATCGCCC GCGCTGCGAG
GTGCGGCTGC ACCGGGGCGA GCCGGTCATC GTGCACTGGT ACGCGCACGC CGACGGCGAG
GCGGTCCGCG CGCTCACCCG CGTCGAGACC TCCGGCGATC GGCTCTCGCG CGTGCGCAAC
TACTTCTACA CGCCCGACGT CATCGCCGAG GTGTGCGGCG AGCTCGGCCT CCCGTACCGC
ATCAACGGCT ACCGCTACTG GTGA
|
|---|
| Protein sequence | MTTPPEPTPP LAGAVQASWH RFLDTYEPLR PELYRYCRSL ARSPWDADDL VQDAMARAFV
TLGCMDGPPD NPRAWLFRVA SNLWIDRLRR TREDAGDVPE GAAAPEPRAS REAAGTLIGR
LSPQERAAVV LKEAFDLSLE EIAEALSTSV GAVKAALHRG RGKLAEPDEA LTAAPSAPVL
DAFCAAFNAG DLERLVALLL DTASVEVVRV HAEYGRDAAR KGVFQGMMYG SRRLAGVDGQ
TTGIDPRYRL GALPDRPRCE VRLHRGEPVI VHWYAHADGE AVRALTRVET SGDRLSRVRN
YFYTPDVIAE VCGELGLPYR INGYRYW
|
|---|
| |