| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_2145 |
|---|
| Symbol | |
|---|
| ID | 3889866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | - |
|---|
| Start bp | 2422211 |
|---|
| End bp | 2422876 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 637863683 |
|---|
| Product | sigma-24 (FecI-like) |
|---|
| Protein accession | YP_465352 |
|---|
| Protein GI | 86158567 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0186921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGAGGCC CCGGCCGCCC GCGAGCGCGG GCCGGCGCAC CCCCGGACAC GGCCGGGCGC
CCGGAAAGTT CCCGGAACGA CGCGCCCCGG CGGGCCCGCC GCCTCTCGCC GGGAACCTTT
TCGCGGTTTC GCGTGTCTCA CCCACCGGTG CCCGGCGGCT TCCTCCAGCG TGCGCTCGCG
CAGGTCCCGT TCCTCCGCCG GAACGGGCGC CGCCTCGCGC GCAACGCCGC CGACGCGGAC
GACCTGGTGC AGGAGACGCT GGTGCGCGCG CTGGAGCGCC AGGCGGAGCT GCGCGACCCG
GCCCGCCTGC GCGGCTGGCT CGGCACGCTG CAGCGCTCCA TCCACCTGAA CGCGGTGCGC
GGGCTGCGGC CGCGGCTGGA GGTGCTGGAG GGCGGGCGCG CCGCGGAGGC GACGCCGGAC
GCCGCCCCCA CCGCCGAGGA GGCGCTGCTG GCCCGCGCGC TCGGCGACGG GCTCGCGGCG
GCGCTCGGCG CGCTCCCGCC GGAGTGGCGC GAGGCGCTGT GGCTGCGCGA GGTGGAGGAG
CTGTCGTACC AGGAGATCGC GCGGGTGCAG GGGTGCCCGG TGGGCACGGT GCGCTCGCGC
CTGGCGCGGG CGCGGCGGGA GCTCGCCGGC CGCCTGCGCG CGGAGGACCG CCATGTCGGC
CTGTAG
|
|---|
| Protein sequence | MGGPGRPRAR AGAPPDTAGR PESSRNDAPR RARRLSPGTF SRFRVSHPPV PGGFLQRALA
QVPFLRRNGR RLARNAADAD DLVQETLVRA LERQAELRDP ARLRGWLGTL QRSIHLNAVR
GLRPRLEVLE GGRAAEATPD AAPTAEEALL ARALGDGLAA ALGALPPEWR EALWLREVEE
LSYQEIARVQ GCPVGTVRSR LARARRELAG RLRAEDRHVG L
|
|---|
| |