Gene Adeh_1929 details

Gene Information

• Locus tag: Adeh_1929
• Symbol: rpsE
• ID: 3887094
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: -
• Start bp: 2178202
• End bp: 2178711
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637863467
• Product: 30S ribosomal protein S5
• Protein accession: YP_465137
• Protein GI: 86158352
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACCA CCCCCATCAA CGCGAACGAG CTCGAGCTCC AGGATCGCGT CGTCCACATC 
AACCGCGTCG CCAAGGTCGT GAAGGGCGGC CGCCGGTTCA GCTTCTCGGC GCTCGTCGTC 
GTCGGCGACG GCGCGGGCCA CGTCGGGGTC GGCCTCGGCA AGGCGAACGA GGTCCCGGAG 
GCCATCCGCA AGGGCGGCGA CCAGGCCAAG AAGAACCTGT TCAGGGTGCC GCTCGTCGGG 
ACCACCATCC CGCACGAGGT GCTCGGGCAC TTCGGCTCCG GCCGCGTGCT GCTGAAGCCG 
GCGGGCGAGG GCACCGGCGT CATCGCCGGC GGCGCCGTCC GCGCCGTCCT CGAGGCGGCC 
GGCGTCCGCA ACGTGCTCAC CAAGAGCCAG GGCTCCCGCA ACCCCCACAA CGTCCTCAAG 
GCGACCGTCG CCGGCCTGAA GCGGCTGCGG TCCGTCGAGG ACAGCGCCCG GCTCCGCGGC 
AAGCAGGCCG CCGAGATCAC CGGGGCGTAG 

 

Protein sequence

MATTPINANE LELQDRVVHI NRVAKVVKGG RRFSFSALVV VGDGAGHVGV GLGKANEVPE 
AIRKGGDQAK KNLFRVPLVG TTIPHEVLGH FGSGRVLLKP AGEGTGVIAG GAVRAVLEAA 
GVRNVLTKSQ GSRNPHNVLK ATVAGLKRLR SVEDSARLRG KQAAEITGA