Gene Adeh_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_1914 
Symbol 
ID3887079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp2168993 
End bp2169484 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content77% 
IMG OID637863452 
Product16S rRNA processing protein RimM 
Protein accessionYP_465122 
Protein GI86158337 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTCG TCCGGATCGG CAAGGTGGTC CGGGCGCTCG GGCTCAAGGG TCACCTGGGC 
GTGGCCGGGT CGGAGGGCGC GCTCGGGACG CTCGAGCGCG TCGTGCTCCG GCACGGCGCG
GCCGAGGTGG AGCGGAAGGT GCTGGAGGCG CGGCCGCAGG GGCGCCTCTG GGCGGTGCGG
ATCGACGGCG TCGCCGATCG CACCGGGGCC GAGGCGCTGG TCGGGGCCGA GGTGCTCGCG
CCTCGCGAGG AGCTGGGCGA GGCGGGAGAG GGCAGGCACT ACTGGGGCGA CCTGGAGGGC
CTGCCGGTGG TGACCGTCCA GGGCGAGGCG CTCGGGACGG TGACCGGGCT GATGGAGACC
GGCGCGGTGG ACGTGCTGGT GGTGCAGGGC GCGCGGGGCG AGCTGCTGGT GCCGCTCGCG
CCGTACGTCG AGGTGGATCG CGCGGCGGGC CGGGTGGTGG TGGACCCGCC GGAAGGGCTC
CTGGAGCCGT AG
 
Protein sequence
MALVRIGKVV RALGLKGHLG VAGSEGALGT LERVVLRHGA AEVERKVLEA RPQGRLWAVR 
IDGVADRTGA EALVGAEVLA PREELGEAGE GRHYWGDLEG LPVVTVQGEA LGTVTGLMET
GAVDVLVVQG ARGELLVPLA PYVEVDRAAG RVVVDPPEGL LEP