| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1682 |
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| Symbol | |
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| ID | 3887592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007760 |
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| Strand | - |
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| Start bp | 1928895 |
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| End bp | 1929881 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 637863218 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_464892 |
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| Protein GI | 86158107 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00200841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGG AGCGGCTGCA GAAGTATCTG GCGGGGGCGG GCATCGCCTC GCGGCGCAAG
GCGGAGGCGC TCATCAGCGC CGGGCGGGTG CGCGTCAACC AGCGCACGGT GACCGAGCTG
GGCACCAAGG TGGATCCGGG GCGCGATCTC GTCACGGTGG ACGGCGCGCT GGTCTCGCAG
CCGGACCAGC GCAGCTACTA CCTGCTCTAC AAGCCCTCCG GCTGCGTCAC CACCGCCTCG
GATCCGCAGG GCCGCCCCAC CGCCATGGAG TACCTGCGCG GCGTGCCGGG GCGGCCGTTC
CCGGTGGGCC GGCTCGACTA CGACGCCGAG GGCGCGCTGC TGCTCACCGA CGACGGCGAG
CTGGCGAACC GCCTGGCGCA CCCGCGCTAC GGCCACCAGC GCGTCTACCT GGTCAAGGTG
AAGGGCGATC CGCCGGCGGA GGCGCTGGAG CGGATGAAGG CCGGCGTCCG CCTGGAGGAC
GGCCCCGCGC GCGCGATCGA GGCGGCCGTC CACGATCACG CCGACCGCAA CGTGTGGATC
CGCGTGGTGG TGGGCGAGGG GCGCTTCCAC CTGGTGAAGC GGCTCTGCGA GGCGGTGGGG
CTGCAGGTGC AGCGCCTGTT CCGGCCGGAG TTCGGCGGCA TCGGCGTCGG CGGGCTGCGG
CCCGGCAAGT TCCGCCGGCT CCAGCCCGAG GAGGTGCGCG CGCTGCGGCA GCGGGTCGGG
CTCGAGTCCG GCACGCCAGC CCGGGGGCCG TCGGTCCGCG AGCTCCCGAA GGCGGCCCGC
CGCCACGGCC ACGGGCCGCC GGCGGCGCCC GGCGCGGCCC CGGCGCCCGC CGAGCCGGGC
TCGCCGGACG AGGTCGAGCC GCGCGGACGC GGCGCGCCGC GCGCCGGCGC GAGGCCCGCC
GCGCCGCGCC CGGGCGGCCG CGCCTCCAGG CCCTCCCGGC CGTCGCGCCC CTCGCGGCCG
GGCGGCGCCG GCGGCCGGCG CCGCTGA
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| Protein sequence | MAEERLQKYL AGAGIASRRK AEALISAGRV RVNQRTVTEL GTKVDPGRDL VTVDGALVSQ
PDQRSYYLLY KPSGCVTTAS DPQGRPTAME YLRGVPGRPF PVGRLDYDAE GALLLTDDGE
LANRLAHPRY GHQRVYLVKV KGDPPAEALE RMKAGVRLED GPARAIEAAV HDHADRNVWI
RVVVGEGRFH LVKRLCEAVG LQVQRLFRPE FGGIGVGGLR PGKFRRLQPE EVRALRQRVG
LESGTPARGP SVRELPKAAR RHGHGPPAAP GAAPAPAEPG SPDEVEPRGR GAPRAGARPA
APRPGGRASR PSRPSRPSRP GGAGGRRR
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