Gene Adeh_1678 details

Gene Information

• Locus tag: Adeh_1678
• ID: 3887588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: +
• Start bp: 1923845
• End bp: 1924501
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637863214
• Product: sigma-24 (FecI-like)
• Protein accession: YP_464888
• Protein GI: 86158103
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.387697
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGCGG TGGCCGCACT CCCCGATCTA GCTTTCGCGC TCACCTGTCC GGCGAAGGAG 
CGCTCGTTGG GTCCCTCACT GTCCGGCGAG GCCGCGTGGA CGCGGTCGGC CGCGCGAGGC 
GACCGGCAGG CCTTCTCCCG GCTGGTGGAC CTGCACAAGC GCACCGTGTT CGCGCTGTGC 
GTCCGGCTGC TGCGGGACCA GGACGAGGCG CAGGACGCCG CGCAGGAGGC GTTCGCCCGC 
GCCTACGCGA GCCTGGCCGC GTTCGACCCC TCGCAGCCGT TCGCGCCCTG GCTGCTCCGC 
ATCGCGCGGA ACCACTGCCT CGACGTGATC CGCCGCCGCC TGCCGCAGGC GCAGCGGGTC 
GAGCTGGACG CGGCTCCGGA GGACGGCGCG CCGCGCGACC TCGCCGACCC GGACGCGCCG 
CGCGGCGACG ACGCGCTGGA GCGCCGCGAG CTGGCGCGCA CGCTCGAGGC CGCGGTGGCG 
GCCCTGCCGG CCAACTACCG CGAGGTCGTG CACCTCTTCC ACGTCGAGCA TCTCTCGTAC 
AAGGAGATCG CCGCCGCCAT GGACGTCCCC ATCGGCACCG TGATGACCTG GCTGCACCGC 
GCCCGCGCGC GGCTCAAGGC GACCCTCGAC GCGAACGCCC CGGAGACGAC GCCATGA 

 

Protein sequence

MVAVAALPDL AFALTCPAKE RSLGPSLSGE AAWTRSAARG DRQAFSRLVD LHKRTVFALC 
VRLLRDQDEA QDAAQEAFAR AYASLAAFDP SQPFAPWLLR IARNHCLDVI RRRLPQAQRV 
ELDAAPEDGA PRDLADPDAP RGDDALERRE LARTLEAAVA ALPANYREVV HLFHVEHLSY 
KEIAAAMDVP IGTVMTWLHR ARARLKATLD ANAPETTP