| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1643 |
|---|
| Symbol | |
|---|
| ID | 3888142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 1884830 |
|---|
| End bp | 1886221 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637863179 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_464853 |
|---|
| Protein GI | 86158068 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCG ACTGGATCGC GAAGCGTCGT GGGCAGGCCA ACGTCAGCCA GATGCACTAC
GCCCGCGACG GCGTGGTCAC CGAGGAGATG GCGTTCGTGG CGGCGCGCGA GCGCCTCGAG
CCCGAGCTGG TCCGCGCCGA GGTGGCCCGC GGCCGGATGG TGATCCCGGC GAACGTCCGC
CACCCCGAGC TCGAGCCGCT CGCGATCGGC ATCGAGGCCT GCTGCAAGAT CAACGCGAAC
ATCGGCAACA GCGCCGTCAC CTCGAACATC GACGAGGAGC TGGCCAAGCT GCGGGTCTGC
CTGAAGTACG GCGCCGACAC GGTGATGGAC CTCTCCACCG GCGGCGACAT CCCGCAGATC
CGCGAGGCCA TCCTGCGCGC CAGCCCGATC CCGGTGGGCA CCGTGCCCAT CTACGAGTGC
CTGGCGCACG TGAAGGACGT GGCCGACCTC ACGCCCGAGC TGATGCTCGA GATCATCGAG
GCGCAGGCGG CGCAGGGCGT GGACTACATG ACCATCCACG CCGGCGTGCT GCGGGACTTC
ATCCCGCTCG CGGCGCACCG GATCACCGGC ATCGTCTCGC GCGGCGGCGC CCTGATGGCG
CAGTGGATGC TCGCGAACAA GGCGGAGAAC CCGTTCTTCA CGCACTTCGA GCAGATCTGC
GAGATCTTCA AGCGCTACGA CGTGACCTTC TCGCTGGGCG ACGGGCTGCG CCCGGGCTGC
CTCGCCGACG CCTCCGACGC GGCGCAGTTC GCGGAGCTGA AGGCGCTCGG CGACCTGACC
CGCAAGGCGT GGGAGCACGG CGTGCAGGTG ATGGTCGAGG GCCCGGGCCA CGTCCCGCTC
GACCAGATCC CCATGAACAT GGAGAAGGAG CGGGAGCTCT GCAGCGAGGC CCCGTTCTAC
GTGCTCGGGC CGCTCGTCAC CGACATCGCC CCCGGCTACG ACCACATCAC CAGCGCCATC
GGCGCGGCGG TGGCGGCGCA GCACGGCGCG GCCATGCTCT GCTACGTCAC GCCGGCCGAG
CACCTCGGGC TGCCGGACAT CGACGACGTC CGCGAGGGCA TCGTCGCCTA CAAGATCGCG
GCCCACGCGG CCGACGTGGC GCGCCACCGG CCGGGCGCCC GCGACCGCGA CGACGCGCTC
TCCCGCGCCC GCTACGCGTT CGACTGGAAC AAGCAGTTCG AGCTGTCGCT CGACCCGGAC
ACGGCGCGCG CGAAGCACGA CGAGACGCTG CCGCACGAGG CGTTCAAGTC GGCGGAGTTC
TGCTCGATGT GCGGGCCGAA GTTCTGCTCG ATGAAGATCC ACGGCCACCT CGCCGAGGCC
GCCGCCGCCC AGGACGAGGC GGCGAACGGC GCGGCCGCGA AGCCGGCCGG CGGCCTGCAG
GTCCTCCCCT AG
|
|---|
| Protein sequence | MRADWIAKRR GQANVSQMHY ARDGVVTEEM AFVAARERLE PELVRAEVAR GRMVIPANVR
HPELEPLAIG IEACCKINAN IGNSAVTSNI DEELAKLRVC LKYGADTVMD LSTGGDIPQI
REAILRASPI PVGTVPIYEC LAHVKDVADL TPELMLEIIE AQAAQGVDYM TIHAGVLRDF
IPLAAHRITG IVSRGGALMA QWMLANKAEN PFFTHFEQIC EIFKRYDVTF SLGDGLRPGC
LADASDAAQF AELKALGDLT RKAWEHGVQV MVEGPGHVPL DQIPMNMEKE RELCSEAPFY
VLGPLVTDIA PGYDHITSAI GAAVAAQHGA AMLCYVTPAE HLGLPDIDDV REGIVAYKIA
AHAADVARHR PGARDRDDAL SRARYAFDWN KQFELSLDPD TARAKHDETL PHEAFKSAEF
CSMCGPKFCS MKIHGHLAEA AAAQDEAANG AAAKPAGGLQ VLP
|
|---|
| |