Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1612 |
Symbol | |
ID | 3888111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1846433 |
End bp | 1849831 |
Gene Length | 3399 bp |
Protein Length | 1132 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 637863148 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_464822 |
Protein GI | 86158037 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.929723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCACG CTCCCCGCTA CGCCGAGCTC CGCTGCAAGT CCTGCTTCTC CTTCCTGGAG GGCGCGAGCC ATCCCGAGGA GCTGGTGGGG CGCGCGGCCG AGCTCGGGCT CTCCGGGCTC GCCCTCGCCG ACGTGAACGG GCTGTACGGC ATCGTCCGCG CGCACGCCGA GGCGAAGCGC CAGGGGCTCC CGCTCATCGT GGGCGCGGAG CTGGTGGTGG CCGGGCTCGC GCCGGGGCGC CCGGCGCGGC TGGTGCTGCT CGCCCAGGAT CGCGAGGGCT ACGCGGGGCT GTGCCGGCTG GTGACGCGGG CGCACTGCGG CGAGGGCTGG ACCGGCGCGC CGCCGCGCCG CGAGCGGGAC GCGGTCGCGG TGCCGTTCGA GGCGGTCGCG GCCGGCGCGC GGGGGCTGTT CGCGCTGTAC CCCGGCGCCG ACGGCGACGC GGTCGCGCGG CTGAAGGACG CGTTCGGCCG GCGGGCGGCG CTCGCGGTGG CGCGCCACCG GGTGGCCGGC GAGGAGGCGC GCGTGCTCGC GGCCCGCTCC GCGGGGCGGC GGCTCGGGGT GCCGGTGGCG GTGACGAACG ACGTCCACAC GCACGCGCGC GCCCGGCAGG TGCTGCAGGA CGTGCTCACC TGCGTGCGCC ACGGCACCAC CGTGGACCGG GCCGGGCGGC GCCTGTTCCC GAACGCCGAG CGGACGCTGA AGGGGCCCGA GGAGCTGGCG CGGCTGTGGA GCGACTTCCC CGAGGGGCTC GCGGCCGCCG CCGACATCGC CGACCAGTGC CGGTTCCGCA TGGAGGAGAT CCGCGGCGAG CACCCGCTCC CGCCGGTGGT GGTCGAGCGC GGCGGGCTCG CCGGCGGCGT CGAGGTCGCC ACCTCCAGCC CGGCACAGGC GGCGCGGGAC GGCGCGCGCT CCACCACGCC CAGCCTGCGG CTCCGCGCCT CGCTCCCGGC GGAGCCGCCC GCCGCGCCCG CGCCCGAAGC TCCCGCTGCC GCCGCGGCCC CCGGCCTCGC CGCCTCCGCC GCCTCCGTCG CCGCGGACAC GGGCGCGGAT CGCGACGGGG CGCTCGCCGG GATGGCGCTG CTGCGCGAGC TGGTGCGCGA GGGCGCGCGG TGGCGCTACG GCGGCGAGCC GCCGGAGGAC GTGGCCCGGC AGCTCGCCCG CGAGCTCGAC CTGGTCGAGT CGCTCGGGTA CGCGAGCTAC TTCCTCACGG TCTGGGACGT GGTCCGGTTC GCGCGCTCGC GCGGGATCCT CTGCCAGGGG CGCGGCAGCG CGGCCAACTC CGCGGTCTGC TACGTGCTCG GCATCACCTC CATCGACCCC GTGCGCATGG GGCTCCTGTT CGAGCGGTTC ATCTCCGCCG AGCGCGGCGA GCCACCCGAC ATCGACGTGG ACTTCGAGCA CGAGCGCCGC GAGGAGGTGC TCCAGTACGT CTACCAGCGC TACGGCCGCG ACCGCGCCGG GATGGTCTGC GAGGTGATCA CCTACCGGGG CAAGTCGGCG CTCCGCGACG TGGGGAAGGC GCTCGGGCTC TCGCTCGGCC AGGTGGACCG GCTCGCGAAG CTGGTGGGCA GCTACGAGGA CCTGGGCCAG GTGGGCCCGG AGCTCCTCGC GCAGGCCGGG CTCGACGCGG CGGACTCGGA GCGGGTGCGG ATGACGCTCG CGCTCGCGCG AGAGCTGCAG GGCTTCCCGC GCCACCTCTC CATCCACGTG GGCGGCTTCG TCATCACGCG GCGGCCGCTC TGCGAGACGG TGCCCATCGA GCCCGCCGCC ATGCCCGGCC GCACCATCGT CCAGTGGGAC AAGGACGACC TCGCCGAGCT GGACCTGCTC AAGGTGGACC TGCTCGGCCT GGGCATGCTC ACCGCGCTCT CCCGGGCGCT GGCGCTGCTC GCGCGCCACC GGCCGGCCCC TGCCTCGCCC ACCCCGGTGC CGCACCCCGA CGCGCTCGCC ACCATCCCGG CCGAGGATCC GGAGGTGTAC GAGATGCTCG GGCGCGCCGA CTCCATCGGC GTGTTCCAGG TGGAGTCGCG CGCGCAGATG TCGCTCGCCC CGCGGCTGCG CCCGCGCAAC TTCTACGATC TCGTCATCTC GGTCGCGATC ATCCGGCCCG GGCCGATCCA GGGCGGCATG ATCCACCCCT ACCTGCGCCG CCGCGACGGC AAGGAGCAGG TCCGCTACCC GTACGCGCCG CTCGAGCCGG TGCTGGCCCG CACGCTCGGC GTCCCGCTGT TCCAGGAGCA GGCCATGCGC CTGGCGGTGA TCGCCGCGGG GTTCACGCCG GGCGAGGCGG ACGAGCTGCG CCGGGTGATG ACGCACCGCC GCTCGCACGA GAAGCTCGCC GCCATGAAGG CCCGGCTGGT GGCGGGGATG GCGGAGCGGG GCATCTCCGG CGCGGACGCG GAGGAGATCT TCAAGCAGCT GCTCGGGTTC GCCGGGTACG GCTTCCCGGA GTCGCACGCG GCCTCGTTCG CGCTGCTGGT CTACGCCTCG GCCTGGCTGA AGCGCTACCA CCCGGCCGCG TTCGCCTGCG CGCTCCTGAA CAGCCAGCCC ATGGGGTTCT ACGCGCCGCA CACGCTGGTG GAGGACGCGA AGCGGCACGG CGTGGAGGTG CGCGGGGTGG ACGTCGGCTG CAGCGGCTGG GAGAGCAGCC TGGAGGGCGC GGCGCCCGGG CGGCCCGCCG CGCCGGGCGA GGCGGCGGTG CTGCGCGTGG GGCTGCACGC CATCCGCGGC CTCCCGCGCG CGGTGGGCGA GGCCATCCTC GAGGCGCGGG CGGCCGGCCC GTTCGGCTCG GTGGCGGAGC TGGTCCGCCG CGCCCGGCTC TCCCGCGCCT GGCTGGTGCG GCTGGCCGAG GCGGGCGCGC TCGGGACGCT CGCGCCCGAC CGCCGCGGCG CCGTCTGGCG CAGCCTGGCG GTGGAGGCGG ACGGCGGCGA CCTGTTCGCG GGCCTGGCGC CGCCGGAGCC CGAGGCGGCG CTCCCGGAGG CCTCCGCCGC CGACGAGGTC TCGGCCGACT TCACCACCAC CGGCCTGTCG GTGCGCGGCC ACCCCATGGC GCTGGTGCGA CCCGGGCTGG GCGGCGACCG GATCCGCACC GCGCGCGAGC TGGGGCGGCT CCCGGATCGC GCGCCGGTCG AGGTGGCGGG GCTGGTCATC GTCCGGCAGC GGCCGGAGAC CGCCCGCGGC ATCGTGTTCG TGAGCCTGGA GGACGAGACC GGGATCGCGA ACCTGGTGGT GATGCCGGAC GTGTACGAGC GCTTCCGGCC GGTGGTCCGC GGCGCGCCGT TCCTGCTGGC GCGCGGGCGG GTGGAGCGGA GCGGGAAGGT GGTGAACGTG CGGGTGGACT CGGTGGCCCC GCTCGCGCTC GCGCCCTCCA TGGACGCGCG CGCCCGCGAC TTCCACTGA
|
Protein sequence | MSHAPRYAEL RCKSCFSFLE GASHPEELVG RAAELGLSGL ALADVNGLYG IVRAHAEAKR QGLPLIVGAE LVVAGLAPGR PARLVLLAQD REGYAGLCRL VTRAHCGEGW TGAPPRRERD AVAVPFEAVA AGARGLFALY PGADGDAVAR LKDAFGRRAA LAVARHRVAG EEARVLAARS AGRRLGVPVA VTNDVHTHAR ARQVLQDVLT CVRHGTTVDR AGRRLFPNAE RTLKGPEELA RLWSDFPEGL AAAADIADQC RFRMEEIRGE HPLPPVVVER GGLAGGVEVA TSSPAQAARD GARSTTPSLR LRASLPAEPP AAPAPEAPAA AAAPGLAASA ASVAADTGAD RDGALAGMAL LRELVREGAR WRYGGEPPED VARQLARELD LVESLGYASY FLTVWDVVRF ARSRGILCQG RGSAANSAVC YVLGITSIDP VRMGLLFERF ISAERGEPPD IDVDFEHERR EEVLQYVYQR YGRDRAGMVC EVITYRGKSA LRDVGKALGL SLGQVDRLAK LVGSYEDLGQ VGPELLAQAG LDAADSERVR MTLALARELQ GFPRHLSIHV GGFVITRRPL CETVPIEPAA MPGRTIVQWD KDDLAELDLL KVDLLGLGML TALSRALALL ARHRPAPASP TPVPHPDALA TIPAEDPEVY EMLGRADSIG VFQVESRAQM SLAPRLRPRN FYDLVISVAI IRPGPIQGGM IHPYLRRRDG KEQVRYPYAP LEPVLARTLG VPLFQEQAMR LAVIAAGFTP GEADELRRVM THRRSHEKLA AMKARLVAGM AERGISGADA EEIFKQLLGF AGYGFPESHA ASFALLVYAS AWLKRYHPAA FACALLNSQP MGFYAPHTLV EDAKRHGVEV RGVDVGCSGW ESSLEGAAPG RPAAPGEAAV LRVGLHAIRG LPRAVGEAIL EARAAGPFGS VAELVRRARL SRAWLVRLAE AGALGTLAPD RRGAVWRSLA VEADGGDLFA GLAPPEPEAA LPEASAADEV SADFTTTGLS VRGHPMALVR PGLGGDRIRT ARELGRLPDR APVEVAGLVI VRQRPETARG IVFVSLEDET GIANLVVMPD VYERFRPVVR GAPFLLARGR VERSGKVVNV RVDSVAPLAL APSMDARARD FH
|
| |