| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1576 |
|---|
| Symbol | |
|---|
| ID | 3888104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 1803741 |
|---|
| End bp | 1806035 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637863107 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_464786 |
|---|
| Protein GI | 86158001 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC CGCTCCCCGC GCTGCCGCCG GTGCGCGCGC CGGTGGGCGC GACGCCCACG
GTGCGCCGCC GGCTGGCGCT GCAGCGCTCG CGGCCGCTGC TCATCCGCGC GTACGCGCTC
CTGCTCGGCG AGGCCGGGCT GGCCGGCCCC ATCGCCCGCC GCCGGGCGGC GCGCTTCGCG
GTGCGCAGCC TGCCGGCGCT GGTCACGGTG GCGGTGGGCG CGCTCGTGGC GCTGCGCGGG
TTCGAGTCGG CCGCGGGGTG GGCGCAGGTG GCCGCGATGG CGGTGCTGGC GGTCGCGCTC
GGCGCGCTGG TGTGGCGCCG GGTGGCGCGC GCGGCCGCCG GGGAGCAGGC GGGCTACCGC
GAGCAGCTCG AGCTGGGCTC GCTGTTCGTG GTGGCCGCGT ACGCGGTCGC GCAGAGCGCG
AGCTTCGGGC ACGCGGAGTC GGCGTTCCAG CCGGTGGTCT ACCTGGTGAT GGCGTTCCTG
GTGGCGTTCC TCGCCCCGGG CGTCGGCGCC GGGCTGGTGG CGCTGGCGGT GACGCTCGAG
GCGCTGCTGT GGGCCGGGCG CGGCGCGCGG GTCGCGGAGC TGCCCGAGGC GGTGGTGCAC
GCCGGGTTCG TCACGGTGTT CGCGGTGCTC TACTACGCGG TGCTGGCCGG GCAGGTCGCG
GCCAGCCGGC GCGACGAGCG GCTCGCCATC GAGCGGCGGA TGAAGGAGAT CGACCACCTG
GCGCGCGCGT TCCGGCTGAG CGTGGCGGCG CCGGACGACG CGCAGGATCC GGCCGAGCGC
GAGCGCCGCT GGAGCGAGGG CGCGGTCATC GAGGTCGAGG CGGCCGTGGG CGGGGCGCTC
GAGGTCGCGG TGGCCGCCCT GCGCTGCCAC ACCTGCGCGC TGTTCTGGCT GAGCGAGGAC
GAGAAGACGC TCACGCTGCT CGACTGCCGC TCGCCCAGCG AGGCGGTGGG CCGCGAGCCG
CTGCCGGCCG GCGAGGGCCC GCTCGGCGGC GCGGTGCGGC GGCGCTCCCC GGTGCGGCTC
CACGGCGAGG TGAAGGCCGT CAGCTACTAC GCCGACGGCA CGCGGCCGAA GGCGCTGCTG
GCCGCGCCGC TGGTGGACCC GCGCGGCGGC CACGTCCGCG GCGTGGTGCT GGTGGACCGG
ATGGAGCCGA CGCCGTTCAC CGAGGCCGAG GAGAAGCTCC TCGTCACGCT CGCCGCCGAG
ATCCTGCGGG CGGTCGGCGC CGAGCGGCTG ATGAAGGACG TCCGCCAGAC GCGCGCCGAG
GTGGACCGGT TCTACCGCTC CATCGAGCGG CTGAACCGCA CCCGCAAGCT CTCCGAGGTC
TACGACGCGC TGGTGGGCGT GGCCTCGGAG ATGGTGACGG TGGACTTCGC CGCGGTCGCG
CTGCGCGACG AGGTGGATCC GTCCAAGGTG CGCGTGGTCC GGGTGGCGGG CGGGGAGGGG
GAGCGCACCG GCGCGGCCGG CCTCGACGAC CTGGAGTTCG CCATGGGCGA CGGGTGCCTC
GTCTCCTCGG CCATCAAGAT CGACGACGTG CTCCCGGTGA ACGCGCTCGA CCCCGCCAAG
ACGCGGGTGT TCGGCGCGGT GTGCCTGCGC GGCCTCGCCT CGCTCAAGAT CTTCCCGCTC
AAGGTCGGCG AGCGCTCCAT CGGCGCGCTG GTGGTGGGCG CGAAGCGCGC CGGCGCCTAC
GGCCGCGACG CGGTCCAGCA GCTGCTCGTC ATCTCCATGC ACGCGGCGCA GTCCATCGAC
CGCGCCCGCC TGTTCGACCA GACCGAGCGC CTCGCCACCA CCGACGGCCT CACCGGCCTC
ACCAACCACC GCACCTTCCA GGAGCGGCTG GACGCGCACC TGGGCCAGGC GCAGCGCTAC
GGGAAGCGGA CCTCGCTGCT GCTCTGCGAC ATCGACCACT TCAAGTCGGT GAACGACACC
TACGGCCACC CGGTGGGGGA CCAGGTGCTG CGCGGGGTGG CGAGGACGCT GGCGCGGGCG
GCGCGCGGCA CCGACGTGGT GGCGCGCTAC GGCGGCGAGG AGTTCGCCAT CGTCATGCCG
GAGACCGACA CCGGCGGCGC GATGGTGATC GCCGAGCGCA TCCGCGAGAA GGTCGGCCAG
CTCGTCTTCG AGACCGAGCA GGGTCCCCTC AAGGTCACGC TGTCGCTGGG GGTCGCGACG
TTCCCCGACG ACGGCGGCCA GAAGCCGGCG CTGATCGAGC GCGCCGACGC CTGCCTCTAC
CACGCCAAGC GGCACGGCCG GAACCAGAGC GTCTCGGCGG CCAGCCTGCG CGCCCCTCGC
CGCGCCGCGG TGTGA
|
|---|
| Protein sequence | MSEPLPALPP VRAPVGATPT VRRRLALQRS RPLLIRAYAL LLGEAGLAGP IARRRAARFA
VRSLPALVTV AVGALVALRG FESAAGWAQV AAMAVLAVAL GALVWRRVAR AAAGEQAGYR
EQLELGSLFV VAAYAVAQSA SFGHAESAFQ PVVYLVMAFL VAFLAPGVGA GLVALAVTLE
ALLWAGRGAR VAELPEAVVH AGFVTVFAVL YYAVLAGQVA ASRRDERLAI ERRMKEIDHL
ARAFRLSVAA PDDAQDPAER ERRWSEGAVI EVEAAVGGAL EVAVAALRCH TCALFWLSED
EKTLTLLDCR SPSEAVGREP LPAGEGPLGG AVRRRSPVRL HGEVKAVSYY ADGTRPKALL
AAPLVDPRGG HVRGVVLVDR MEPTPFTEAE EKLLVTLAAE ILRAVGAERL MKDVRQTRAE
VDRFYRSIER LNRTRKLSEV YDALVGVASE MVTVDFAAVA LRDEVDPSKV RVVRVAGGEG
ERTGAAGLDD LEFAMGDGCL VSSAIKIDDV LPVNALDPAK TRVFGAVCLR GLASLKIFPL
KVGERSIGAL VVGAKRAGAY GRDAVQQLLV ISMHAAQSID RARLFDQTER LATTDGLTGL
TNHRTFQERL DAHLGQAQRY GKRTSLLLCD IDHFKSVNDT YGHPVGDQVL RGVARTLARA
ARGTDVVARY GGEEFAIVMP ETDTGGAMVI AERIREKVGQ LVFETEQGPL KVTLSLGVAT
FPDDGGQKPA LIERADACLY HAKRHGRNQS VSAASLRAPR RAAV
|
|---|
| |