Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_1547 |
Symbol | clpX |
ID | 3888074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1770469 |
End bp | 1771752 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637863077 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_464757 |
Protein GI | 86157972 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.298419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCCGGA AAGAGCATCA CCACGGAAAC CTGTCCTGCT CGTTCTGCGG CAAGGGCCAG CGGGAGGTCC GCAAGCTCAT CGCGGGGCCC ACCGTCTACA TCTGCGACGA GTGCATCCGG CTCTGCAACG ACATCATCGC GGAGGAGGCC GAGCGGGACG AGGGCCGTCC GGCCGTCTCG CTGCCCACCC CGGCCGAGAT CAAGAGCTTC CTCGACGACT ACGTGGTCGG GCAGGACCGC GCGAAGAAGG TCCTCTCGGT CGCGGTCTAC AACCACTACA AGCGCGTCTA CTCGCGCAAG CCGGCCCGGC CGCAGCGCCC GGGGCAGGCG CGCGCGGCCC AGGACGACGT CGAGCTGCAG AAGTCGAACA TCCTGCTCGT CGGGCCCACC GGCTCGGGCA AGACGCTGCT GGCGCAGTCG CTGGCGCGCT TCCTCAACGT CCCGTTCACC ATCGCCGACG CCACCAGCCT CACCGAGGCG GGCTACGTGG GCGAGGACGT CGAGAACATC ATCCAGAACC TGCTGCACAA CGCCGACTAC GACGTGGAGA AGGCGTCGCG CGGCATCGTC TACATCGACG AGATCGACAA GATCGCGCGC AAGGGCGACA CGCCCTCGCC GACCCGCGAC GTGGGCGGGG AGGGCGTCCA GCAGGCGCTC CTCAAGATCA TCGAGGGCAC GCGCGCCAAC GTCACCCCGC GCGGCGGCAA GAAGTACAAC CAGCAGGAGT ACATCCAGGT CGATACCTCG AACGTGCTGT TCATCGTGGG CGGCGCGTTC TGCGGGCTGG AGCAGGTCAT CCGCCGGCGG GTCGGCGTGA AGGGGCTCGG CTTCGGGGCC AAGATCGAGC GCAAGGAGGA GGCCAGCCTG GGCGAGCTGC TCGCGCGGGT GGAGCCCGGC GACCTGGTGC GCTTCGGGAT GATCCCCGAG TTCGTCGGCC GCCTGCCCAT CGTCGCGACG CTGTCCGACC TGGGCGAGGA CGACCTCGTC ACCATCCTCA CCCAGCCGAA GAACGCGCTC ACGAAGCAGT ACATCAAGCT CTTCGACCTG GAGAAGGTGA AGCTGTCCTT CACCAAGGAG TCGCTGCGGG CCACCGCCCG CGAGGCGATG CGGCGCAAGT CGGGCGCCCG CGGCCTGCGC GCCATCCTCG AGCAGGCCAT GCTCGACATC ATGTACGACG TGCCGTACCG GGAAGGCGTG AAGGAGTGCA AGATCACGGA GGGCGTGATC GTGAACCGCG AGCCGCCGCT CCTGAGCTTC GAGAAGGAGA AGCGGACCGC CTGA
|
Protein sequence | MSRKEHHHGN LSCSFCGKGQ REVRKLIAGP TVYICDECIR LCNDIIAEEA ERDEGRPAVS LPTPAEIKSF LDDYVVGQDR AKKVLSVAVY NHYKRVYSRK PARPQRPGQA RAAQDDVELQ KSNILLVGPT GSGKTLLAQS LARFLNVPFT IADATSLTEA GYVGEDVENI IQNLLHNADY DVEKASRGIV YIDEIDKIAR KGDTPSPTRD VGGEGVQQAL LKIIEGTRAN VTPRGGKKYN QQEYIQVDTS NVLFIVGGAF CGLEQVIRRR VGVKGLGFGA KIERKEEASL GELLARVEPG DLVRFGMIPE FVGRLPIVAT LSDLGEDDLV TILTQPKNAL TKQYIKLFDL EKVKLSFTKE SLRATAREAM RRKSGARGLR AILEQAMLDI MYDVPYREGV KECKITEGVI VNREPPLLSF EKEKRTA
|
| |