Gene Adeh_1482 details

Gene Information

• Locus tag: Adeh_1482
• Symbol: mnmA
• ID: 3887873
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaeromyxobacter dehalogenans 2CP-C
• Kingdom: Bacteria
• Replicon accession: NC_007760
• Strand: +
• Start bp: 1708819
• End bp: 1709874
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 637863011
• Product: tRNA-specific 2-thiouridylase MnmA
• Protein accession: YP_464692
• Protein GI: 86157907
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
• TIGRFAM ID: [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0684106
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATCC TGGTCGCCAT GTCGGGCGGG GTCGACAGCT CGACCGCCGC CGCCCTCCTC 
GCCGGCGAGG GGCACGAGGT GATCGGCGTC ACCATGCGCG TGGCCGACTA CTCCGACGCG 
GCCCGCGGCC GGTCCTGCTG CGCGCCGGAC GACGTCGAGG ACGCGCGCGC GGCGGCGCGG 
CGCCTGGGCA TCCCGTTCTA CGTCGCCAAC GTCGAGGCCC GCTTCCGCGA GCGCGTCATC 
GACCGCTTCG TGGACGACTA CGTCGAGGGC CGCACGCCCA ACCCGTGCGT CGCCTGCAAC 
ACCGAGGTGA AGTTCGACTG GCTCCTGGCC CGGGCGCGGG CCCTCGGCGC GAAGCTCGCC 
ACCGGGCACT ACGCCCGCGT CGAGGAGCGG GGAGGGCGTC GCCGCCTGCT CACCGCCGCG 
GATCCGGCGA AGGACCAGAG CTACTTCCTC TACGGCCTGG GCCAGGACGC GCTCGGCGAC 
GTGCTGTTCC CGGTGGGCGC GCTGGCGAAG CCCGCGGTGC GGGCCGAGGC CGCGCGCGCC 
GGCCTGGCGG TGGCGGAGAA GCCGGACTCG CAGGAGATCT GCTTCGTGAC CCTCGGCGAC 
GCGGGGGACT TCGTGGCGCT GCGCGCGCCG GCGCGGGTCC GGCCGGGCGA GATCGTCTCC 
ACCGCGGGCG AGGTGCTGGG CCGGCACGAC GGCGTGCACC GGTTCACCGT GGGGCAGCGC 
CGCGGGCTCG GGCTCGCGGG CCCGGCGCCG CGCTACGTGG TCCGGCTGGA CGCCGCGGCC 
GCGCGGGTGG TGGTGGGGAG CGCCGAGGAG GCCTCGCGCG ATCGCTTCGA GGTGCGCGAG 
GCGACCTGGG TGTCCGGCGC GCCGCCCGGG GGCGCCGTCG AGCTGCGGGT GAAGGTGCGC 
CACCGGCACG AGGGCGAGCG CGGCACGGTG CGCGCGCGGG CGGGCGGCGC GGGCGCGGAG 
GTCCGCCTGG CGCGGCCGGT GCGCGGCGTG GCGCCGGGGC AGGCGGCGGT CTTCTACGAC 
GGGGACGAGG TGGTGGGCGG CGGGCGCATC GCCTGA 

 

Protein sequence

MRILVAMSGG VDSSTAAALL AGEGHEVIGV TMRVADYSDA ARGRSCCAPD DVEDARAAAR 
RLGIPFYVAN VEARFRERVI DRFVDDYVEG RTPNPCVACN TEVKFDWLLA RARALGAKLA 
TGHYARVEER GGRRRLLTAA DPAKDQSYFL YGLGQDALGD VLFPVGALAK PAVRAEAARA 
GLAVAEKPDS QEICFVTLGD AGDFVALRAP ARVRPGEIVS TAGEVLGRHD GVHRFTVGQR 
RGLGLAGPAP RYVVRLDAAA ARVVVGSAEE ASRDRFEVRE ATWVSGAPPG GAVELRVKVR 
HRHEGERGTV RARAGGAGAE VRLARPVRGV APGQAAVFYD GDEVVGGGRI A